| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_21691 |
|---|
| Symbol | |
|---|
| ID | 4777500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1924892 |
|---|
| End bp | 1926343 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640087679 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001018169 |
|---|
| Protein GI | 124023862 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0470032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGGG GCATGCAGCA GATCGATGGG CTGACCAATA CTCCCCGCTG GGTTGCCCAG
GCGGTGGTGT ATCAGATCTT CCCTGATCGT TTTCGTTGTA GTGGCCGTGT CTTAGCTCAT
CAGCATTTGG CTTTGCGCTG CTGGGGCAGT GACCCTTCTG AGCAGGGTTT TCAGGGGGGA
GATCTCTACG GGGTGATCGA GGCCCTTGAT CATCTCCAGG CGCTTGGTAT CAGCTGCCTT
TACTTGACAC CCGTCTTTAG CTCTGCCGCT AACCATCGCT ATCACGCTTA TGACTACTTG
CAGGTGGATC CGCTTCTTGG TGGCAATGCA GCGCTAGAGG CTTTGATTGA GGCGGTGCAT
CGCCGCGGGA TGCGCATCAT TTTGGATGGC GTGTTTAATC ACTGTGGTCG CGGGTTCTGG
GCTTTTCATC ATCTTTTGGA AAATGGTGAG GCTTCGCCTT ATCGCGATTG GTTTGAGGTG
CGGCAATGGC CGCTTCATCC CTATCCACGG CGTGGGCAGG ATTGTGGTTA CAGCTGCTGG
TGGAACGATC CAGCCTTGCC AAAGTTCAAT CATGCCCATG CCCCTGTGCG TGAGTATTTG
ATTGCTGTAG CCCGCTATTG GCTCGAGCAG GGAATCGATG GTTGGCGACT TGACGTTGCT
GATGAGGTGC CTGCTGAGTT TTGGCTGGAG TTTCGGCAAA TGGTTAAGGC CGTGAATCCA
GACGCTTGGA TCTTGGCTGA GATCTGGGGT GATGCGAGAT CGTGGCTACA GGGGCAGCAC
TTTGATGGTG TGATGAATTA TCGGATGGGT TGGAGCAGCC TTTGCTGGGT TGCTGGTAAG
CGATTACGCC GTCGGTATCG CAATCCTGCC TATCCCCTTG ACCCTCTGAG TGGGGAGGCT
TTTGTTGAGC TATTGGCAAC AACGCTGGGT TGGTATCGAC CTGAGGTGAA CCGCAGCCAG
TTGAACCTGC TTGATAGCCA CGATGTGCCG AGAGCTCTGC ACACACTTCA CGGTGATCTT
GCGGCGTTGA AGTTGGCCTT GCTGTTGCTG TTTTTGCAAC CAGGGGCGCC TTGCATCTAC
TACGGCACAG AGGCGGGTTT GCAGGGTGGC CCTGAACCAG GTTGCCGCGA AGGGTTTCCT
TGGCATACGC CTTGGCCTGC AGACCTGCGC GATTTCATTC AGTCGTTGAG TGATCTGCGC
CAACGTTGCC CAGCGTTTGC TGATGGCGGT TTGCAATGGC AACCGATTGG AGCTGATGCA
CTTCATGCTT GGTGGATGCA GCCCGAGACA ACCACAACGC AAAGGGAGAC GTCGATTCAG
GTGTGGGTCA ATCGCAGTCG CAGGTCATGG TTGCCGACGA AAGTCTCATC GACAGACCCT
CTTTGGCTGG AAGGAGCATT TGAATGCAAT GGCCGGGGAT TAGGCCCTCA ATCAGCAGTG
TTGTTGAGCT GA
|
|---|
| Protein sequence | MQWGMQQIDG LTNTPRWVAQ AVVYQIFPDR FRCSGRVLAH QHLALRCWGS DPSEQGFQGG
DLYGVIEALD HLQALGISCL YLTPVFSSAA NHRYHAYDYL QVDPLLGGNA ALEALIEAVH
RRGMRIILDG VFNHCGRGFW AFHHLLENGE ASPYRDWFEV RQWPLHPYPR RGQDCGYSCW
WNDPALPKFN HAHAPVREYL IAVARYWLEQ GIDGWRLDVA DEVPAEFWLE FRQMVKAVNP
DAWILAEIWG DARSWLQGQH FDGVMNYRMG WSSLCWVAGK RLRRRYRNPA YPLDPLSGEA
FVELLATTLG WYRPEVNRSQ LNLLDSHDVP RALHTLHGDL AALKLALLLL FLQPGAPCIY
YGTEAGLQGG PEPGCREGFP WHTPWPADLR DFIQSLSDLR QRCPAFADGG LQWQPIGADA
LHAWWMQPET TTTQRETSIQ VWVNRSRRSW LPTKVSSTDP LWLEGAFECN GRGLGPQSAV
LLS
|
|---|
| |