Gene P9303_21161 details

Gene Information

• Locus tag: P9303_21161
• Symbol: rpsD
• ID: 4777076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 1876791
• End bp: 1877399
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640087624
• Product: 30S ribosomal protein S4
• Protein accession: YP_001018116
• Protein GI: 124023809
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCGAT ACCGCGGCCC TCGACTGAGG ATCACGCGGC GCTTGGGAGA TCTACCAGGT 
CTCACCCGGA AGGCCGCTAA GCGGTCCCAT CCCCCCGGTC AGCACGGCCA AGCCCGTCGC 
AAGCGCTCCG AATACGCGAT CCGCCTCGAA GAGAAACAGA AGCTCCGCTT CAACTACGGA 
ATTTCCGAAC GGCAGCTTGT GCGCTACGTG AAGAAAGCCC GTGCCCAAGA TGGCTCTACA 
GGAACCAACC TGCTCAAGCT GTTGGAGAAC AGACTCGATA ACGTCTGCTT CCGCCTCGGT 
TTTGGACCCA CAGTTCCAGG TGCTCGTCAA CTGGTGAACC ATGGCCATGT GACCGTGAAC 
GGCCGTGTTC TCGACATTGC TAGTTACCAA TGCAAAGCCG GTGATGTGGT TGCCATTAGA 
GAGCGCAAAG GCAGCAAAAA GCTGGCCGAA GCGAACCTAG AGTTCCCCGG ATTGGCAAAT 
GTGCCGCCAC ATATCGAGCT CGATAAAGCA AAAATGAGCG CCAAGATCAT TAGCAAGTGC 
GAACGTGAAT GGGTCGCACT TGAGATCAAC GAACTGCTGG TGGTGGAGTA CTACTCCAGA 
AAGGTTTGA 

 

Protein sequence

MSRYRGPRLR ITRRLGDLPG LTRKAAKRSH PPGQHGQARR KRSEYAIRLE EKQKLRFNYG 
ISERQLVRYV KKARAQDGST GTNLLKLLEN RLDNVCFRLG FGPTVPGARQ LVNHGHVTVN 
GRVLDIASYQ CKAGDVVAIR ERKGSKKLAE ANLEFPGLAN VPPHIELDKA KMSAKIISKC 
EREWVALEIN ELLVVEYYSR KV