Gene P9303_21111 details

Gene Information

• Locus tag: P9303_21111
• Symbol: hupE
• ID: 4777063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 1872887
• End bp: 1873450
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640087619
• Product: putative hydrogenase accessory protein
• Protein accession: YP_001018111
• Protein GI: 124023804

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.543051
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGGTTA AGCCAGCTTT CGCCCATCAC CCCTTCGCAA TGCCAGAGGC GGGAAATCTC 
AATGCCCTGC AGGGTTTAAT CAGTGGGGTT GGCCATCCAC TACTGGGGCC AGACCACCTC 
TTGTTTCTGT TGGCGATTGG TTTCGTGGGC TTGAACAGAC CACGCCAATG GCTGGCACCA 
TTACTAGCAG CTGGTCTTCT CGGTAGTGCG ATCTCCCTAC TCATCCCCCT GCCAGAAACT 
CTCTCTGTTT ATGCAGAAGC GCTTGTCTCA CTGAGCCTTG CCGTTGCTGG CCTTGTGGCT 
TTAGGCAAAG CATCTCCTTT GCTTTTGGTC CCTTTAATTT CCCTACATGG ATATCTATTA 
GGTGGAGCAA TCATAGGAGC AGAACCAACT CCACTAACAG CTTATTTCCT AGGATTGTTC 
ATTAGTCAGG GAAGTATTCT TTTGCTTGTG ACAACATATT CAAAGCGTCT TCTTGATAGC 
ATCGGCAACG GCGGGCAACA CATTGCCGCA GGCATTTGGA TCGGTATTGG AGCCGCTTTT 
ACCTGGTCAC TATTAATTCC TTAA 

 

Protein sequence

MLVKPAFAHH PFAMPEAGNL NALQGLISGV GHPLLGPDHL LFLLAIGFVG LNRPRQWLAP 
LLAAGLLGSA ISLLIPLPET LSVYAEALVS LSLAVAGLVA LGKASPLLLV PLISLHGYLL 
GGAIIGAEPT PLTAYFLGLF ISQGSILLLV TTYSKRLLDS IGNGGQHIAA GIWIGIGAAF 
TWSLLIP