Gene P9303_17471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_17471 
Symbol 
ID4778116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand+ 
Start bp1527832 
End bp1528857 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content53% 
IMG OID640087254 
Productputative mRNA binding protein 
Protein accessionYP_001017754 
Protein GI124023447 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCA AAGAACGCTG CCTTAGACCT CCATCCTGCA GGGCGAAGGG CCTTCAGTTG 
CTGATCGAAC GCGCTTCAAT ATGCGCGTTT GATGATTCAG CTGTTTTGAA GATTCTGATC 
ATGGGGGGGA CCCGATTTGT CGGCAAGCCT CTGGTTACTC GACTTCAGGC CCAAGGCCAT 
GCGCTCACGT TGTTCACTCG TGGCCGCCAT TCTTTGCCAG ATGGTGTGGA ACATCTCAGT 
GGTGATCGAA CCACCACTGA GGGGCTGAGT CGTCTTCAAG GCCGAAGCTT CGATGTCATC 
GTCGACAGCT CAGGGCGCAA GCTTGAAGAC AGTCAAAGGG TGGTGGCCTG TACAGGAGAG 
CCAAAGCATC GTTTCCTCTA TGTCAGTTCC GCTGGCGTCT ATGCGGATTC CGAACACTGG 
CCACTGAATG AGGAGAGTGC CACCGACCCG AACAGTCGTC ATGCCGGCAA GGCTCAGACC 
GAATCATGGC TGCTTCAGCA AGGAATTCCC TTTACCAGTT TCCGACCTAC TTATATCTAT 
GGTCCTGGTA ATTACAACCC GATTGAACGT TGGTTTTTCG ATCGTATCGT CCATAACCGA 
CCGGTTCCGT TGCCACGAGA TGGCACCACC ATCACCCAAT TGGGGCATGT TGTTGATCTG 
GCTGATGCCA TGGTTCGTTC CCTTGAGGTG GAGACAGCGA CGAATCGCAT TTACAACTGT 
TCCAGCAAGC GTGGTATCAC CTTCAGGGGC TTGATTGCAG CGGCAGCAAG GGCTTGTGGC 
AAAGATCCAA ATACCGTTGA GCTTCGTTCT TTTGATCCTT CAGGCCTGAA TCCCAAAGCT 
CGTAAGGCCT TCCCGCTGAG GCTGAGTCAT TTCCTTACCG ATATCACCAG GGTGGAGCGG 
GAATTGGCCT GGCAACCACG CTTTGACCTT GAGACTGGCC TCGAAGATAG CTACTGCAAC 
GACTACTCCT TGAAGCCAAC GGCTGAACCA GATTTCAGTG CCGATCAATC CTTGATCGGG 
GTTTGA
 
Protein sequence
MIGKERCLRP PSCRAKGLQL LIERASICAF DDSAVLKILI MGGTRFVGKP LVTRLQAQGH 
ALTLFTRGRH SLPDGVEHLS GDRTTTEGLS RLQGRSFDVI VDSSGRKLED SQRVVACTGE 
PKHRFLYVSS AGVYADSEHW PLNEESATDP NSRHAGKAQT ESWLLQQGIP FTSFRPTYIY 
GPGNYNPIER WFFDRIVHNR PVPLPRDGTT ITQLGHVVDL ADAMVRSLEV ETATNRIYNC 
SSKRGITFRG LIAAAARACG KDPNTVELRS FDPSGLNPKA RKAFPLRLSH FLTDITRVER 
ELAWQPRFDL ETGLEDSYCN DYSLKPTAEP DFSADQSLIG V