| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_15431 |
|---|
| Symbol | pykF |
|---|
| ID | 4776168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 1344316 |
|---|
| End bp | 1346133 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640087052 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_001017552 |
|---|
| Protein GI | 124023245 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.284197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGTTT CCGCGATGTT TCAGGTCCCG TTGATGGCCC AGATCGATCT GACACGACGG
ACCAAAATCG TTGCCACCAT AGGTCCGGCA ACCGAGACCG CCGAACGAAT CCGAGAACTC
GTTCAGGTAG GTGCTACCAC CTTCCGGCTG AATTTCTCAC ACGGCGACCA TGACGAGCAC
GCCAAGCGCA TCTCCACCAT CCGCCAGGTC TCTGATGAAT TGGGGATGCA CATTGGCATT
CTTCAAGACT TGCAAGGCCC CAAAATTCGC CTGGGTCGTT TTGATAAGGG GCCTATCACT
TTGGCCAATG GCGATCCCTT CGCACTGACC TCAAAACAAG TTCAATGCAA TCAGTCAGTG
GCAACCGTCA CTTACGAAAA GCTTGCAGAC GAAGTCACGA CCGGCAGTCG AATCTTGCTT
GATGACGGTC GAGTGGAGAT GAAAGTCGTA AAAATCGATC AAAGCGAACA AACCTTGCAC
TGCATCGTCA CAGTGGGAGG GGTGCTCTCA AATAACAAGG GAGTGAATTT CCCTGATGTA
CAGCTATCGG TTCGCGCCCT TACAGAGAAA GATCGCCAAG ATCTCGCCTT TGGCCTCCAG
CAAGGGGTGG ACTGGGTCGC ACTGAGCTTT GTGCGAAACC CTTCGGACAT GAAAGAGATC
CGCAAACTCA TCGGGGATCA TGGGCACAGC ACCCCAGTGA TCGCGAAGAT CGAGAAATTT
GAGGCGATTG ATCAAATCGA TTCAATCCTT CCTCTCTGTG ATGGAGTCAT GGTTGCAAGG
GGGGACCTAG GCGTTGAGAT GCCAGCCGAA GAGGTGCCTC TACTGCAAAA GGATTTGATT
CGCAAGGCCA ACAGCCTTGG AATTCCAATC ATCACAGCCA CCCAGATGCT CGACTCGATG
GCCTCGAGCC CGAGGCCCAC CAGAGCAGAA GTGAGTGATG TAGCAAATGC GATCCTTGAT
GGTACTGATG CAGTGATGCT CTCGAACGAA ACCGCTGTAG GAGACTATCC AGTGGAGGCG
GTTCAAACGA TGGCCACCAT TGCCAGACGG ATTGAACGGG ACTATCCACA GCGTCCAATC
GAAACTTATC TTGCCAGCAC CATTTCCAAC GCGATTAGTT CAGCCGTAAG CAGCATCGCC
AGTCATCTCA ACGCGGCAGC AATCGTGCCA CTAACTGAAA GTGGTGCCAC TGCCCACAAC
GTCAGCAAAT TCCGCCCAGC AGCGCCAATT TTGGCCGTCA CCAACGAAGT GGCTGTAGCA
AGAAAACTTC AATTGGCATG GGGTGTCACC CCACTGCTTG TCCCAACCCA GAAAAGCACC
ACTGCAACCT TCAGTGCTGC AATTGCTGTT GCCCAGGAAT TGGGTCTTCT CAAAGAAGGA
GATCTAACAA TTCAAACTGC AGGAACCCTT GCTGGCGTGA GCGGGTCCAC AGATCTTGTC
AAAGTAGGAA TTGTCAGTGC AGTGCTTGGC CAAGGGATCG GTATTGGCAA TGGCACCGTT
AGCGGCAAGG TCAGATTTGC TTTCTCCCCA AACGACTCAA CAAAAATTGA ACCAGGGGAG
ATTCTGGTCA TTCATGAAAC AAGCGATGAC TATCTCGATG CAATCAGAAA GTCTGCAGGA
GTGATTACAG AACAAGAAGG AGAGGAATCC CACGCAGCCG TGATCTCAAA ACGCCTAGGG
ATTCCGTTCA TCATTGGGAT AGCACATGCC ACGAGAAACC TGCTTGAAGG AGAGGTGGTA
ACAATGCAGC TCAGTAATGG CAAAGTTCAT CGCGGCACAG GCGGCAAGCT GCCAATGAAG
CTCGACTCAA TGCTTTGA
|
|---|
| Protein sequence | MVVSAMFQVP LMAQIDLTRR TKIVATIGPA TETAERIREL VQVGATTFRL NFSHGDHDEH
AKRISTIRQV SDELGMHIGI LQDLQGPKIR LGRFDKGPIT LANGDPFALT SKQVQCNQSV
ATVTYEKLAD EVTTGSRILL DDGRVEMKVV KIDQSEQTLH CIVTVGGVLS NNKGVNFPDV
QLSVRALTEK DRQDLAFGLQ QGVDWVALSF VRNPSDMKEI RKLIGDHGHS TPVIAKIEKF
EAIDQIDSIL PLCDGVMVAR GDLGVEMPAE EVPLLQKDLI RKANSLGIPI ITATQMLDSM
ASSPRPTRAE VSDVANAILD GTDAVMLSNE TAVGDYPVEA VQTMATIARR IERDYPQRPI
ETYLASTISN AISSAVSSIA SHLNAAAIVP LTESGATAHN VSKFRPAAPI LAVTNEVAVA
RKLQLAWGVT PLLVPTQKST TATFSAAIAV AQELGLLKEG DLTIQTAGTL AGVSGSTDLV
KVGIVSAVLG QGIGIGNGTV SGKVRFAFSP NDSTKIEPGE ILVIHETSDD YLDAIRKSAG
VITEQEGEES HAAVISKRLG IPFIIGIAHA TRNLLEGEVV TMQLSNGKVH RGTGGKLPMK
LDSML
|
|---|
| |