Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_11031 |
Symbol | |
ID | 4778740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 986113 |
End bp | 986796 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640086612 |
Product | BRCA1 C-terminus domain-containing protein |
Protein accession | YP_001017117 |
Protein GI | 124022810 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.795038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGATA AGTCAGCGAA ATGGATCACA GCCCTGCGCG ACGGGATCAG ACGACAATGT GGCGATGGCT GGATGGTTCG CGGCGTTGGT GACGGGCTAC TCCAGAGGGT TCAGCTGACT GTGCGCTTCG ACGATGGCAC CCGCACCAGC ATCATCCTCG GTCCAAAGGC CAAGAGCGAT CCTGATTTCG TTCCATGGAT CGCAACAAGC GCTGATTGGA TCTTGAAAAT TTCAACTGAG ATCTCTGAGT TAATGAAAGA TCAGGGCAAA GGATTGACTG ATGCCTACGA GTTGGTGAAA CAAAGAAACG AGTCTGGAGC TGATGGTGAA TTCGATTGGG AACGACTACT AAAAAAATTC AAATCACATA AAACAAGTAA AAGCAAAAAT GGAGCCCGGG TTTGGAACCG TAACTACCGC ACTCCCCTTG CCCGTACAGT CGTTATTCTC ACAAGCCAGC CTGAACCCAG CTCTGGCTAC ACGCTCTTGA AAGCATTGAT CGAACGTCAT GGAGGAGAGC CCGGCTCTAC AAGCAGAAGA CTTCGCATTC AGTACGCAGC AGAATTCCTT CGCTTCGCGT TTAAACATGG CGCCAACAGG CGTTGGCTAC CACCGGAAGA TCTCAAGACA TTGATCGGCG AAAAAAGTGT CGATTTCACT CAGAACAACG TCAACACGGT GTAG
|
Protein sequence | MADKSAKWIT ALRDGIRRQC GDGWMVRGVG DGLLQRVQLT VRFDDGTRTS IILGPKAKSD PDFVPWIATS ADWILKISTE ISELMKDQGK GLTDAYELVK QRNESGADGE FDWERLLKKF KSHKTSKSKN GARVWNRNYR TPLARTVVIL TSQPEPSSGY TLLKALIERH GGEPGSTSRR LRIQYAAEFL RFAFKHGANR RWLPPEDLKT LIGEKSVDFT QNNVNTV
|
| |