Gene P9303_05331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_05331 
SymbolelaC 
ID4776444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp517230 
End bp518186 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content59% 
IMG OID640086038 
Productbeta-lactamase superfamily hydrolase 
Protein accessionYP_001016550 
Protein GI124022243 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID[TIGR02651] ribonuclease Z 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGTCA CCTTTCTCGG CACCAGCTCG GGCGTACCGA CACGAGCCCG CAATGTTTCT 
GCCGTGGCTC TGCGGCTGCC CCAACGTGCT GAGTTGTGGC TGTTTGATTG CGGAGAAGGC
ACTCAGCATC AGTTCCTGCG CAGCGATCTG CGTCTGTCTC AACTCAGACG AGTGTTCGTT
AGCCACATGC ATGGCGACCA TGTGTTTGGC CTGCCGGGTC TGTTGGCCAG CCTCGGCCTA
TCCGGCAACA GCAACGGAGT GGATCTCTAC GGCCCCGATC CACTGGAAAG CTATCTGCAA
GGCGTGCTGC GCAATAGCTC CACCAGGATC GGATACCCCC TCAAGGTTCA TCGCGTGCGA
GACGCAGCAG AGCAGAACCT GATTGTGTTT GAAGACAAAG ACATCCTGGT GCGCTGCACC
CCGCTCACCC ATCGCGTGCC GGCCTACGCC TATCGCGTGG AGCAAAAACC CAAGCCAGGC
CATTTCAACC TTGAACGAGC CCAACGCCTC GGCATCCCGC CAGGCCCCGT CTATGCCGCC
TTAAAGCGTG GTGAACAGGT CAGCCTCGAT GATGGGCGCG TGGTGGATGG CCGGGACTTC
TGCGGACCAG ATCGCCCAGG CGCCAGCATC GTGTTCTGCA CCGATACGGT GTTTTCAGAA
GCTGCTGTGG CCCTAGCCGC AGGCGCGGAC CTGCTAATCC ACGAAGCAAC CTTCGCCCAT
AGCGAAGCAG AAATGGCTTA TCAGAAGCAG CACTCCACCA GCACCATGGC GGCCCAAACA
GCTGCCGAAG CCGGCGTCGG GAAACTCGTA TTAACCCACC TCAGTCCACG CTATGCGCCA
GGCAATCCGG TTACCCCAAA TGACCTGCTA CGAGAAGCTC AAGCGATCTT TTCGAACACC
ATCCTCGCCA AGGATTTCCT CAGTTTTGAA GTCGCTCCGC GCTGCAACAG TTCTTGA
 
Protein sequence
MQVTFLGTSS GVPTRARNVS AVALRLPQRA ELWLFDCGEG TQHQFLRSDL RLSQLRRVFV 
SHMHGDHVFG LPGLLASLGL SGNSNGVDLY GPDPLESYLQ GVLRNSSTRI GYPLKVHRVR
DAAEQNLIVF EDKDILVRCT PLTHRVPAYA YRVEQKPKPG HFNLERAQRL GIPPGPVYAA
LKRGEQVSLD DGRVVDGRDF CGPDRPGASI VFCTDTVFSE AAVALAAGAD LLIHEATFAH
SEAEMAYQKQ HSTSTMAAQT AAEAGVGKLV LTHLSPRYAP GNPVTPNDLL REAQAIFSNT
ILAKDFLSFE VAPRCNSS