Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_17881 |
Symbol | icd |
ID | 4911677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 1508651 |
End bp | 1510075 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640161390 |
Product | isocitrate dehydrogenase |
Protein accession | YP_001092012 |
Protein GI | 126697126 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAT TTGAAAAATT AACTTTACCT AATGAAGGCG AAATAATAAC TTTTAATCAA GGCAAACCTA ATGTTCCTAA TAATCCAATT GTCCCATTTA TTCGGGGTGA TGGTACTGGA GTTGATATTT GGCCTGCAAC TCAAATCGTT CTTGATTCAG CTATTAAAAA AAGCTACAAA GATGAAAGAA AAATTAATTG GTTTAAAGTC TATGCAGGCG ATGAAGCTTG TGAACTTTAT GGAACATATA ACTATCTCCC TCAAGATACT ATTGAAGCAA TCAAACACTT TGGTGTAGCC ATCAAAGGGC CTTTAACGAC TCCCATCGGA GGAGGTATTA GATCTCTTAA TGTTGCATTA AGGCAAATAT TTGATTTATA TAGCTGTGTT AGGCCATGTA AATATTATTC AGGAACTCCA AGCCCTCACA AAAATCCTCA AAATTTAGAC GTTATTGTTT ATAGAGAAAA TACTGAGGAT ATCTACATGG GAATTGAATG GGAAGCGGAG GATAATAATT GTCTTGAATT AATTAATCAC TTAAATAACG TTGTAATACC AAAAAGTAAA AATTTAAAAA ATAGATCTAT ACCCGACGGA TCAGGTATTG GAATAAAACC AGTGAGTAAA TCTGGTAGCC AAAGGCATAT TAGAAAAGCT ATTGAACATG CCAAAAGATT ATCAGGAGAT AAAAGGCATG TGACTCTTGT ACATAAAGGG AATATTATGA AATATACAGA AGGTGCATTT AGAGATTGGG GATATGAATT AGCAGTAAAT GAATTTAGAG AAGATTGCAT TACAGAAAGA GAAAGCTGGA TTTTAGATAA TATTCAGAAA AATCCAGAAA TTACAATTGA AAATAATGCT CGAAAAATTG AACCGGGTTT TGACAAGCTT ACAAATAATA AAAAAGCATT CATTTGCGAA GAAATTAAAG AAGTTATTGC ATCAATATCA AATTCTCACG GAGATGGAAA ATGGAAAGAA CTTATTCTTG TTGATGATCG GATAGCTGAT AGTATATTTC AACAAATTCA AACTAGACCT CAAGAATATT CAATTCTTGC AACCTTAAAT CTCAATGGAG ACTATGTTTC TGATGCAGCT GCAGCAATTG TTGGTGGCCT AGGTATGGCT CCTGGTGCAA ATATTGGAGA TAATGCAGCA ATTTTCGAAG CTACGCACGG TACTGCGCCA AAACATGCAG GTTTAAATAA GATTAATCCA GGCTCAGTGA TTCTTAGTGG TGTAATGATG CTTGAATATT TTGGTTGGGA TGAGGCAGCT AACTTAATTA CTAATGGTTT AAGTAAGGCA ATAGAGCAAA AAAAAGTCAC CTATGATCTA GCACGCTTAA TGGAACCAAA AGTAGAGCCC TTATCCTGCA GCAGTTTTGC TGAAGAAATT ATCTCAAATT TCTAA
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Protein sequence | MPKFEKLTLP NEGEIITFNQ GKPNVPNNPI VPFIRGDGTG VDIWPATQIV LDSAIKKSYK DERKINWFKV YAGDEACELY GTYNYLPQDT IEAIKHFGVA IKGPLTTPIG GGIRSLNVAL RQIFDLYSCV RPCKYYSGTP SPHKNPQNLD VIVYRENTED IYMGIEWEAE DNNCLELINH LNNVVIPKSK NLKNRSIPDG SGIGIKPVSK SGSQRHIRKA IEHAKRLSGD KRHVTLVHKG NIMKYTEGAF RDWGYELAVN EFREDCITER ESWILDNIQK NPEITIENNA RKIEPGFDKL TNNKKAFICE EIKEVIASIS NSHGDGKWKE LILVDDRIAD SIFQQIQTRP QEYSILATLN LNGDYVSDAA AAIVGGLGMA PGANIGDNAA IFEATHGTAP KHAGLNKINP GSVILSGVMM LEYFGWDEAA NLITNGLSKA IEQKKVTYDL ARLMEPKVEP LSCSSFAEEI ISNF
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