Gene P9301_17881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_17881 
Symbolicd 
ID4911677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp1508651 
End bp1510075 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content34% 
IMG OID640161390 
Productisocitrate dehydrogenase 
Protein accessionYP_001092012 
Protein GI126697126 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAT TTGAAAAATT AACTTTACCT AATGAAGGCG AAATAATAAC TTTTAATCAA 
GGCAAACCTA ATGTTCCTAA TAATCCAATT GTCCCATTTA TTCGGGGTGA TGGTACTGGA
GTTGATATTT GGCCTGCAAC TCAAATCGTT CTTGATTCAG CTATTAAAAA AAGCTACAAA
GATGAAAGAA AAATTAATTG GTTTAAAGTC TATGCAGGCG ATGAAGCTTG TGAACTTTAT
GGAACATATA ACTATCTCCC TCAAGATACT ATTGAAGCAA TCAAACACTT TGGTGTAGCC
ATCAAAGGGC CTTTAACGAC TCCCATCGGA GGAGGTATTA GATCTCTTAA TGTTGCATTA
AGGCAAATAT TTGATTTATA TAGCTGTGTT AGGCCATGTA AATATTATTC AGGAACTCCA
AGCCCTCACA AAAATCCTCA AAATTTAGAC GTTATTGTTT ATAGAGAAAA TACTGAGGAT
ATCTACATGG GAATTGAATG GGAAGCGGAG GATAATAATT GTCTTGAATT AATTAATCAC
TTAAATAACG TTGTAATACC AAAAAGTAAA AATTTAAAAA ATAGATCTAT ACCCGACGGA
TCAGGTATTG GAATAAAACC AGTGAGTAAA TCTGGTAGCC AAAGGCATAT TAGAAAAGCT
ATTGAACATG CCAAAAGATT ATCAGGAGAT AAAAGGCATG TGACTCTTGT ACATAAAGGG
AATATTATGA AATATACAGA AGGTGCATTT AGAGATTGGG GATATGAATT AGCAGTAAAT
GAATTTAGAG AAGATTGCAT TACAGAAAGA GAAAGCTGGA TTTTAGATAA TATTCAGAAA
AATCCAGAAA TTACAATTGA AAATAATGCT CGAAAAATTG AACCGGGTTT TGACAAGCTT
ACAAATAATA AAAAAGCATT CATTTGCGAA GAAATTAAAG AAGTTATTGC ATCAATATCA
AATTCTCACG GAGATGGAAA ATGGAAAGAA CTTATTCTTG TTGATGATCG GATAGCTGAT
AGTATATTTC AACAAATTCA AACTAGACCT CAAGAATATT CAATTCTTGC AACCTTAAAT
CTCAATGGAG ACTATGTTTC TGATGCAGCT GCAGCAATTG TTGGTGGCCT AGGTATGGCT
CCTGGTGCAA ATATTGGAGA TAATGCAGCA ATTTTCGAAG CTACGCACGG TACTGCGCCA
AAACATGCAG GTTTAAATAA GATTAATCCA GGCTCAGTGA TTCTTAGTGG TGTAATGATG
CTTGAATATT TTGGTTGGGA TGAGGCAGCT AACTTAATTA CTAATGGTTT AAGTAAGGCA
ATAGAGCAAA AAAAAGTCAC CTATGATCTA GCACGCTTAA TGGAACCAAA AGTAGAGCCC
TTATCCTGCA GCAGTTTTGC TGAAGAAATT ATCTCAAATT TCTAA
 
Protein sequence
MPKFEKLTLP NEGEIITFNQ GKPNVPNNPI VPFIRGDGTG VDIWPATQIV LDSAIKKSYK 
DERKINWFKV YAGDEACELY GTYNYLPQDT IEAIKHFGVA IKGPLTTPIG GGIRSLNVAL
RQIFDLYSCV RPCKYYSGTP SPHKNPQNLD VIVYRENTED IYMGIEWEAE DNNCLELINH
LNNVVIPKSK NLKNRSIPDG SGIGIKPVSK SGSQRHIRKA IEHAKRLSGD KRHVTLVHKG
NIMKYTEGAF RDWGYELAVN EFREDCITER ESWILDNIQK NPEITIENNA RKIEPGFDKL
TNNKKAFICE EIKEVIASIS NSHGDGKWKE LILVDDRIAD SIFQQIQTRP QEYSILATLN
LNGDYVSDAA AAIVGGLGMA PGANIGDNAA IFEATHGTAP KHAGLNKINP GSVILSGVMM
LEYFGWDEAA NLITNGLSKA IEQKKVTYDL ARLMEPKVEP LSCSSFAEEI ISNF