Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_17731 |
Symbol | hemF |
ID | 4911897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 1497382 |
End bp | 1498410 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640161374 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001091997 |
Protein GI | 126697111 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.932235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAAAG AACCTCCTAA AAACTCGAGA GAAAAAACTA AAAATCTCTT ATTAACTCTA CAAGACAAAA TTTGTTCAGG CCTTGAAAAT GTAGATGGCA AAGGGAAATT TACAGAGGAA TCCTGGCTAA GAGACGAAGG TGGCGGTGGA AGATCAAGAG TATTGAAAAA TGGTTCTATT TTTGAGCAAG CAGGTGTTAA CTTCTCGGAA GTACAGGGAA AAGAATTACC TCAATCTATA ATCTCTCAAA GACCCGAAGC AAAAGGTCAT GAATGGTTTG CCACAGGAAC TTCTATGGTT TTGCATCCTA AGAATCCCTA CATTCCTACA GTGCATCTGA ATTATCGATA TTTCGAAGCT GGTCCTGTTT GGTGGTTTGG GGGAGGTGCA GATTTAACCC CTTTTTATCC TTATCTTTCT GATGTAAGGA ATTTTCATAA TGAACATAAA AAAGCTTGTG AGAAAGTTGA TCAAGATTTG CATAAAGTTT TCAAACCATG GTGTGATGAA TATTTCTTCT TGAAGCATAG AAATGAATCT AGAGGCATAG GAGGTATTTT TTATGATTAT CAAGATGGTT CAGGCAATAT TTATAGAGGA AATAATCAAA AAGGAGAAGC ATCAAAAGCT TCACAAAATA TTGGCAGATC TAATTTAAAT TGGGATGATT TATTTTCATT AGCGGAAAAC TGTGGGCAGG CATTCCTCCC TTCATATTTG CCTATTATTG AAAAAAGAGC TTCTCAAGCA TATTCATCGA AGGAAAGAGA ATTCCAGCTA TATCGAAGAG GTAGATATGT TGAATTCAAT TTAGTTTGGG ATAGAGGGAC AATTTTTGGA CTGCAAACAA ATGGCAGAAC TGAATCTATA TTAATGTCCT TACCGCCTTT AGCTAGATGG GAATATGGAT ATAAAGCTAG AAAGAATTCT CGAGAGGAAT TTCTTACATC AATATTTACA AAACCCCAAG ATTGGTTAAA CGATAAAGAG TTAGAGAAAT TCTGTATAGA GAATAATATT TTTGATTAA
|
Protein sequence | MLKEPPKNSR EKTKNLLLTL QDKICSGLEN VDGKGKFTEE SWLRDEGGGG RSRVLKNGSI FEQAGVNFSE VQGKELPQSI ISQRPEAKGH EWFATGTSMV LHPKNPYIPT VHLNYRYFEA GPVWWFGGGA DLTPFYPYLS DVRNFHNEHK KACEKVDQDL HKVFKPWCDE YFFLKHRNES RGIGGIFYDY QDGSGNIYRG NNQKGEASKA SQNIGRSNLN WDDLFSLAEN CGQAFLPSYL PIIEKRASQA YSSKEREFQL YRRGRYVEFN LVWDRGTIFG LQTNGRTESI LMSLPPLARW EYGYKARKNS REEFLTSIFT KPQDWLNDKE LEKFCIENNI FD
|
| |