Gene P9301_13871 details

Gene Information

• Locus tag: P9301_13871
• Symbol: yidC
• ID: 4912304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 1153575
• End bp: 1154717
• Gene Length: 1143 bp
• Protein Length: 380 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640160977
• Product: putative inner membrane protein translocase component YidC
• Protein accession: YP_001091611
• Protein GI: 126696725
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0838115
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGGGT TCATTTCTGA AAAACTACTT ATCCCGATTC TAGATTTTTT CTACGGTTTA 
GTTCCTAGTT ATGGTTTAGC GATTGTCGCA TTGACTGTCG TTATTAGAAT TGCACTTTTC 
CCTTTAAGCG CTGGTTCCAT TAGAAGTGCA AGGAGGATGA AAATTGCCCA GCCAGTAATG 
CAAAAAAGAC AAGCAGAAAT AAAATCAAAA TTTTCAGGTG ACCCAAAAAA ACAGCAAGAG 
GAGCTTGGAA AATTAATGAA CGAGTTTGGC AGTCCACTTG CAGGTTGCTT GCCTTTGATT 
GTACAAATGC CTGTTCTTTT TGCACTTTTT GCAACTTTAA GGGGATCTCC TTTCGCTGAT 
GTTCCTTACA ACATAAATCT TAAGGTTGTC CCACAGGATC AAATTGCAGC TATAGATCCA 
AAACCTTATA AATCTCCAAG ACACTCTATA TTCATAACAG AAAAATCACA TTTTCCAGTA 
ATAGCTACCA TTCCCAACGG AACTAAATTA GGAACGGAAG AATCCATCAA AATTAGTCTC 
CAAACAACTA ATGGCAATAG CTACTCAGAA GTTTTATCTA AATATGACAA TGGATCAAAT 
TTTCTCCCTA CTTGGAAGGT CTCAAAAGGC TCAGAGAATC TAAAAGTTTC TCAAGACGGT 
ACAGTAACTG CTATTAAACC AGGTGATGCA ACAATTGAGG CAAAAATACC TGGTTTAGCC 
GCAAAAAGTG GTTTCCTTTT TATTAAAGCT CTTGGTCAAG TTGGGTTTTA TGTGGATGGG 
GCAATTAATT GGGATATTGC AGCACTTGTT GGTGCCTTTG GATTAACCCT CCTTCTTTCT 
CAAGTTCTAT CTAGTCAAGG GATGCCTGCT AATCCACAGC AATCAACAGC AAACAAAATT 
ACACCAGTTA TGATTACTGG AATGTTTCTG TTTTTCCCAC TACCAGCAGG AGTTTTACTG 
TACATGGTTG TTGCTAATAT ATTTCAAGCA TTTCAGACTT TTCTGCTTAA TAAAGAGGCT 
CTTCCTGAGA ATCTACAGAA AATTCTTGAT CAACAATTAT TGGCCAAGAA TGAAGTAATA 
ACAACTACGG CTGCAACTAT CTCAGATAAA AGATTACCTT TTGAACCTAA TAGTAAAAAA 
TAG 

 

Protein sequence

MIGFISEKLL IPILDFFYGL VPSYGLAIVA LTVVIRIALF PLSAGSIRSA RRMKIAQPVM 
QKRQAEIKSK FSGDPKKQQE ELGKLMNEFG SPLAGCLPLI VQMPVLFALF ATLRGSPFAD 
VPYNINLKVV PQDQIAAIDP KPYKSPRHSI FITEKSHFPV IATIPNGTKL GTEESIKISL 
QTTNGNSYSE VLSKYDNGSN FLPTWKVSKG SENLKVSQDG TVTAIKPGDA TIEAKIPGLA 
AKSGFLFIKA LGQVGFYVDG AINWDIAALV GAFGLTLLLS QVLSSQGMPA NPQQSTANKI 
TPVMITGMFL FFPLPAGVLL YMVVANIFQA FQTFLLNKEA LPENLQKILD QQLLAKNEVI 
TTTAATISDK RLPFEPNSKK