| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_12681 |
|---|
| Symbol | rsuA |
|---|
| ID | 4911403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 1078483 |
|---|
| End bp | 1079205 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640160857 |
|---|
| Product | pseudouridine synthase, Rsu |
|---|
| Protein accession | YP_001091492 |
|---|
| Protein GI | 126696606 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.850167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCA GAATAAATAA ATATTTAAGT GAAGTCGGTT ATTGTTCTAG AAGAGAAGCA
GATAAGTTAA TCCTAGAAGG AAAGGTAACT ATAAATGGCG AAATTCCAGA AATTGGAACC
AAAGTAGAAG ATAATGATCA AGTAGAAGTT AAAGGTCAAA GAATAGAAAA ATCAAAGAGA
CAAAAAAACA TATACTTAGC TTTTAATAAA CCTGTAGGAA TTGTTTGCAC AACAGATAAA
AAATTAGAAC CCAATAATGT CATAGATTTC ATTAAATACC CTAAAAGAAT TTTCCCTATC
GGAAGATTAG ATAAGCTCAG TGAAGGATTG ATTTTTTTAA CTAATGATGG AGATATCGTA
AATAAAATAC TCAGAGCAAG AAATAATCAT GAAAAAGAAT ATATTGTAAA AGTTAATCGT
CCGATTAATA GCAACTTTAT AAAAAGCATG AGTAATGGAG TGGAAATATT AGACACAATT
ACTAAAAATT GTTTCGTAGA ACAATTGGGT CCAAGAAATT TTAAAATAAT ACTTACACAG
GGGCTTAACC GCCAGATTAG AAGAATGTGT GAGGCCTTAG GATATAGAGT ACGATCATTA
AAGCGTGTAA GGATCATGAA TATTAAGTTA GACGTGCCCA CAGGAGAATA CCGAGAACTT
AGTAAAGAAG AACTTCTAGA ATTAAATGAA TTACTTGAAA ACTCCTCAAA AACATATAAC
TAA
|
|---|
| Protein sequence | MATRINKYLS EVGYCSRREA DKLILEGKVT INGEIPEIGT KVEDNDQVEV KGQRIEKSKR
QKNIYLAFNK PVGIVCTTDK KLEPNNVIDF IKYPKRIFPI GRLDKLSEGL IFLTNDGDIV
NKILRARNNH EKEYIVKVNR PINSNFIKSM SNGVEILDTI TKNCFVEQLG PRNFKIILTQ
GLNRQIRRMC EALGYRVRSL KRVRIMNIKL DVPTGEYREL SKEELLELNE LLENSSKTYN
|
|---|
| |