Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_12121 |
Symbol | recC |
ID | 4911568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1029227 |
End bp | 1032409 |
Gene Length | 3183 bp |
Protein Length | 1060 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 640160799 |
Product | exodeoxyribonuclease V subunit C 125 kD polypeptide |
Protein accession | YP_001091436 |
Protein GI | 126696550 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCAATC TTTATAAGTC AAATAAAATT GAAGTAATTA GTGAGCTGTT AGCAGAGGAA TTAAAAATAT GTCCTCCGGC TATAAATGAG AAATTAGAAA TAGTAGTCCC CAATTACTTT TTTGGGAATT GGTTACGTGA ACAAATAACT ATAAAAAACA AAATAAGTGC TCTTTATGAA TTAAAGACAA TATCAACGTA TACCGAATCT TTATTGACAA ATTTTTTCCC TGCAATTGAT ATGAGCGCAT GGAATTTTGA GTCAATTAAA TGGGGAATTG TTGATTCCTT GGAAGAATTA AATAGCTTTA AAGAATCATT TCCGCTTAGA AATTGGATTA ATAAATATTT GGATAATAAA AAGATAATTG ATGGAGATAT ATATAGTCTG ACAAAAAAGA TCACGAATAA TTTTATTGAT TATCTGATTT TTAGACCTGA AATGATTGCT CAATGGAATA GATATGAAAT TAATTCATCT AGTCTATTTA AGAATTTAAA CTCGGATCAA TTTTGGCAGC CTATTTTATA TAAATTATTA GAGGAAAAGA TATCTGAAAA GCCATCATGT TTATACATGA TTGAAGTAAT AAAGAATTTA AGAAAAATTA AAAACCTTCA ATTTCAAGTG CCAAATCAAA TTTATATTTT TTCAGATAAT AACTTATCTA AACTACATAT TAATTTTTAT TCAGAACTTT CAAAATTTAT TAAGGTAAAT TTGTATTTAT TATCTCCTGG AGAAGATTTA TGGAATAGGA TAAATTGTCT TGAAGGTGAG TTGGAATTTG ATGATAATGA AAGTAAATTG AATTTAAATA ATACAAATAT AGAGAAAATA TTTGGTAAAT TTGGAGCAAA CTTTCAGAAA TTAATTGATG AAAATATTTA TACAGAAGGT ATAAATTTAA AAAATAATCT TATTTATCTC GATCCAACAA CTAATTTTAA TAATAAGAAA GATATTCCTC TTCTTAATCA AATTCAAAAA AGACTAATTG ATAATAGTAC CGTCGATTTT ACAGTAAGTG AAAGGGATGA CTCAATATTA CTTTGTGAGC ATTTTAATCA GAATAGTCAA TTTGAATATT TAAGAAAAAA AATTATAGAG ATAATAAATT CTTGCGAGAA TATTAAATAT AGTGATATTG CTGTTTTATC TCCACAAACA AATTTAATTA AACCTTATCT AAGGTACATC TTTAATAATG AGTTAATTAA TGGAGAAAAG ATACCTTATT TTTTTATTGA TGATGATAAT AATGACTCTG CAGGCATTTA TGAATTTCTA ATTGATATTA CTGAAATAGC AAGTGAAAAA ATTACACTTG AAAAAATAGA TTATATTCTT TCGAAAAAAG TAACTCAGAA CATTTTTGAT TTTAATATTA CTGAGAAGGA TGAAATAATT TTCTTACTAA CCCAAGCAGG GTTTCATTGG GGATTAGATG ATAAAGAAAG ATTAGGTGAA GAGAAAAATA CTCTAGATTG GTGTATAAAT AGAATTACTT TAGGGTTAAT TTATGATAAA GAAGTAAATT TAAGTAATTT TAATTTAAAA CCATTTAGTT ATAAAAATAT TAGTTTGGAT TTGAATAAAT GGGTTAAAAT ATTAATTCAT TTAAAAAAAT ATATTAATTT GATAAGGGGA TCTTTTTCTT ACACGAATTG GGTTGAAAAG ATAAAGTTTA TATTAAAAAG TGTTGCTGAT TCTAATGCAA ATTTCAATTT AGAAATAAGT CAAATAAATA GAATTCTTGA TAATCACGCA ATACCTTTAA TACCTGATGA TCTTATCTTG TTAAAAGTTT TTAGAGAAAT ATTAATTTCT TGCATAAATA AAGTTAAATA TCAAAACAAA TCACGAGTTA ACAAGATCCT AGTAAGTGAT ATTGAGAATT CAAGGCATAT TCCACATAAG GTTATTTTCC TGATAGACAT GAATAGTGTT AATTATCCAA AATTACCAAA GAGTGAAACC ATTAATTTAT TAAAAAACAA ATATCATTTG GGTGATCCAT CTGTTTTTGA AAGAGAGAAA TATGCATTTC TGGAGTTGTT AATTGCCTGC AGAGATAAAT TTATAGTTAC CTGGGTAAAA AATGATAAAG ACAATAAAAA ATTAGATGTT TCTTTTCCTA TAAAAGAGTT AATATCTTTT TTTGATAGTT TCTTAAACCA AAGCCAAAGA GAACTAATAA TTAAAGATTC TGATTTAAAT AAAAATGAAA TAATTGATCT TGATAAATGT CAGATTATTA AAAGTAATTA TTCTTTAATA GAAGATATAA ATTGGAATGA AAAAAAATCT GATATTAAAA ATTACAAGTT ATCAGAATTG ATTTATTGGT TCAAGAATCC ACAAAAATAT TGGCTTAATA AAAACAATAT TTCTCCCAAT GAAATATTTA TTCATCATCC AGACGAGGAG TATGTAAGCA ATCTGCAAAA GTCGCAATTA ATTACAAAAA TAATCCAGCA AATAGAGATT GATAAGCATA ATATTATTGA TGATTTAAAT GAATTAAATA TTAATGATCA ATTGGCTGAA AATGGTATTA TTATGCCCAA AAATAGTATT TTTACAAAAG AAAAAGAAAT CAAAGACTTA TTAAGCAGCC TAGCTGCAAG TTTGAGTCAA CATAATAAAA TTAATAAAAT CTATGTCAAG TTAAATGCGA ATAAAGAAGA ATATTTAATC GCTGATGAAA CCGTAATTGA ATTAATTAAT GCGAAGTTAA GTTTAAGTAG TTTGACTGAG GCTTGGATAA AATTACTCTT TATTTCTTCT TTAAAGAGGA ATATAAAAAG GAGTAAAGTA ATTTTTAGAA CAGAAAATAA TTACAAATCG CAAATTATTC AATCACCCGG AGAAGCTGAA TCAAATCTAA TTTTGGAGGA TTACATAAAT ATTTTTAAAA ATTATTCTGA AAAATGTTTA CCTCTTCCTC CAGAAAGTAC TTATAAATAT GTAGAAGCAA AAATAAAATC AAAAAATGAA AAAAAAGCTT TTACAGATAA ATGGATTGGT AATAAAAATT TTTCTAAAGG AGAAAGAGAT AATATCGTAA TGAAATTGTG TTTTGGTAAT GAAAAAGAAC CAGATTTCTT TCTTAGAAAT AATAATTTTG ATCAATTATC ATACAGATTA TATGGTCCTC TAATTAAAGC ATTAAAGAAA TAA
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Protein sequence | MLNLYKSNKI EVISELLAEE LKICPPAINE KLEIVVPNYF FGNWLREQIT IKNKISALYE LKTISTYTES LLTNFFPAID MSAWNFESIK WGIVDSLEEL NSFKESFPLR NWINKYLDNK KIIDGDIYSL TKKITNNFID YLIFRPEMIA QWNRYEINSS SLFKNLNSDQ FWQPILYKLL EEKISEKPSC LYMIEVIKNL RKIKNLQFQV PNQIYIFSDN NLSKLHINFY SELSKFIKVN LYLLSPGEDL WNRINCLEGE LEFDDNESKL NLNNTNIEKI FGKFGANFQK LIDENIYTEG INLKNNLIYL DPTTNFNNKK DIPLLNQIQK RLIDNSTVDF TVSERDDSIL LCEHFNQNSQ FEYLRKKIIE IINSCENIKY SDIAVLSPQT NLIKPYLRYI FNNELINGEK IPYFFIDDDN NDSAGIYEFL IDITEIASEK ITLEKIDYIL SKKVTQNIFD FNITEKDEII FLLTQAGFHW GLDDKERLGE EKNTLDWCIN RITLGLIYDK EVNLSNFNLK PFSYKNISLD LNKWVKILIH LKKYINLIRG SFSYTNWVEK IKFILKSVAD SNANFNLEIS QINRILDNHA IPLIPDDLIL LKVFREILIS CINKVKYQNK SRVNKILVSD IENSRHIPHK VIFLIDMNSV NYPKLPKSET INLLKNKYHL GDPSVFEREK YAFLELLIAC RDKFIVTWVK NDKDNKKLDV SFPIKELISF FDSFLNQSQR ELIIKDSDLN KNEIIDLDKC QIIKSNYSLI EDINWNEKKS DIKNYKLSEL IYWFKNPQKY WLNKNNISPN EIFIHHPDEE YVSNLQKSQL ITKIIQQIEI DKHNIIDDLN ELNINDQLAE NGIIMPKNSI FTKEKEIKDL LSSLAASLSQ HNKINKIYVK LNANKEEYLI ADETVIELIN AKLSLSSLTE AWIKLLFISS LKRNIKRSKV IFRTENNYKS QIIQSPGEAE SNLILEDYIN IFKNYSEKCL PLPPESTYKY VEAKIKSKNE KKAFTDKWIG NKNFSKGERD NIVMKLCFGN EKEPDFFLRN NNFDQLSYRL YGPLIKALKK
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