Gene P9301_12121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_12121 
SymbolrecC 
ID4911568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp1029227 
End bp1032409 
Gene Length3183 bp 
Protein Length1060 aa 
Translation table11 
GC content25% 
IMG OID640160799 
Productexodeoxyribonuclease V subunit C 125 kD polypeptide 
Protein accessionYP_001091436 
Protein GI126696550 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCAATC TTTATAAGTC AAATAAAATT GAAGTAATTA GTGAGCTGTT AGCAGAGGAA 
TTAAAAATAT GTCCTCCGGC TATAAATGAG AAATTAGAAA TAGTAGTCCC CAATTACTTT
TTTGGGAATT GGTTACGTGA ACAAATAACT ATAAAAAACA AAATAAGTGC TCTTTATGAA
TTAAAGACAA TATCAACGTA TACCGAATCT TTATTGACAA ATTTTTTCCC TGCAATTGAT
ATGAGCGCAT GGAATTTTGA GTCAATTAAA TGGGGAATTG TTGATTCCTT GGAAGAATTA
AATAGCTTTA AAGAATCATT TCCGCTTAGA AATTGGATTA ATAAATATTT GGATAATAAA
AAGATAATTG ATGGAGATAT ATATAGTCTG ACAAAAAAGA TCACGAATAA TTTTATTGAT
TATCTGATTT TTAGACCTGA AATGATTGCT CAATGGAATA GATATGAAAT TAATTCATCT
AGTCTATTTA AGAATTTAAA CTCGGATCAA TTTTGGCAGC CTATTTTATA TAAATTATTA
GAGGAAAAGA TATCTGAAAA GCCATCATGT TTATACATGA TTGAAGTAAT AAAGAATTTA
AGAAAAATTA AAAACCTTCA ATTTCAAGTG CCAAATCAAA TTTATATTTT TTCAGATAAT
AACTTATCTA AACTACATAT TAATTTTTAT TCAGAACTTT CAAAATTTAT TAAGGTAAAT
TTGTATTTAT TATCTCCTGG AGAAGATTTA TGGAATAGGA TAAATTGTCT TGAAGGTGAG
TTGGAATTTG ATGATAATGA AAGTAAATTG AATTTAAATA ATACAAATAT AGAGAAAATA
TTTGGTAAAT TTGGAGCAAA CTTTCAGAAA TTAATTGATG AAAATATTTA TACAGAAGGT
ATAAATTTAA AAAATAATCT TATTTATCTC GATCCAACAA CTAATTTTAA TAATAAGAAA
GATATTCCTC TTCTTAATCA AATTCAAAAA AGACTAATTG ATAATAGTAC CGTCGATTTT
ACAGTAAGTG AAAGGGATGA CTCAATATTA CTTTGTGAGC ATTTTAATCA GAATAGTCAA
TTTGAATATT TAAGAAAAAA AATTATAGAG ATAATAAATT CTTGCGAGAA TATTAAATAT
AGTGATATTG CTGTTTTATC TCCACAAACA AATTTAATTA AACCTTATCT AAGGTACATC
TTTAATAATG AGTTAATTAA TGGAGAAAAG ATACCTTATT TTTTTATTGA TGATGATAAT
AATGACTCTG CAGGCATTTA TGAATTTCTA ATTGATATTA CTGAAATAGC AAGTGAAAAA
ATTACACTTG AAAAAATAGA TTATATTCTT TCGAAAAAAG TAACTCAGAA CATTTTTGAT
TTTAATATTA CTGAGAAGGA TGAAATAATT TTCTTACTAA CCCAAGCAGG GTTTCATTGG
GGATTAGATG ATAAAGAAAG ATTAGGTGAA GAGAAAAATA CTCTAGATTG GTGTATAAAT
AGAATTACTT TAGGGTTAAT TTATGATAAA GAAGTAAATT TAAGTAATTT TAATTTAAAA
CCATTTAGTT ATAAAAATAT TAGTTTGGAT TTGAATAAAT GGGTTAAAAT ATTAATTCAT
TTAAAAAAAT ATATTAATTT GATAAGGGGA TCTTTTTCTT ACACGAATTG GGTTGAAAAG
ATAAAGTTTA TATTAAAAAG TGTTGCTGAT TCTAATGCAA ATTTCAATTT AGAAATAAGT
CAAATAAATA GAATTCTTGA TAATCACGCA ATACCTTTAA TACCTGATGA TCTTATCTTG
TTAAAAGTTT TTAGAGAAAT ATTAATTTCT TGCATAAATA AAGTTAAATA TCAAAACAAA
TCACGAGTTA ACAAGATCCT AGTAAGTGAT ATTGAGAATT CAAGGCATAT TCCACATAAG
GTTATTTTCC TGATAGACAT GAATAGTGTT AATTATCCAA AATTACCAAA GAGTGAAACC
ATTAATTTAT TAAAAAACAA ATATCATTTG GGTGATCCAT CTGTTTTTGA AAGAGAGAAA
TATGCATTTC TGGAGTTGTT AATTGCCTGC AGAGATAAAT TTATAGTTAC CTGGGTAAAA
AATGATAAAG ACAATAAAAA ATTAGATGTT TCTTTTCCTA TAAAAGAGTT AATATCTTTT
TTTGATAGTT TCTTAAACCA AAGCCAAAGA GAACTAATAA TTAAAGATTC TGATTTAAAT
AAAAATGAAA TAATTGATCT TGATAAATGT CAGATTATTA AAAGTAATTA TTCTTTAATA
GAAGATATAA ATTGGAATGA AAAAAAATCT GATATTAAAA ATTACAAGTT ATCAGAATTG
ATTTATTGGT TCAAGAATCC ACAAAAATAT TGGCTTAATA AAAACAATAT TTCTCCCAAT
GAAATATTTA TTCATCATCC AGACGAGGAG TATGTAAGCA ATCTGCAAAA GTCGCAATTA
ATTACAAAAA TAATCCAGCA AATAGAGATT GATAAGCATA ATATTATTGA TGATTTAAAT
GAATTAAATA TTAATGATCA ATTGGCTGAA AATGGTATTA TTATGCCCAA AAATAGTATT
TTTACAAAAG AAAAAGAAAT CAAAGACTTA TTAAGCAGCC TAGCTGCAAG TTTGAGTCAA
CATAATAAAA TTAATAAAAT CTATGTCAAG TTAAATGCGA ATAAAGAAGA ATATTTAATC
GCTGATGAAA CCGTAATTGA ATTAATTAAT GCGAAGTTAA GTTTAAGTAG TTTGACTGAG
GCTTGGATAA AATTACTCTT TATTTCTTCT TTAAAGAGGA ATATAAAAAG GAGTAAAGTA
ATTTTTAGAA CAGAAAATAA TTACAAATCG CAAATTATTC AATCACCCGG AGAAGCTGAA
TCAAATCTAA TTTTGGAGGA TTACATAAAT ATTTTTAAAA ATTATTCTGA AAAATGTTTA
CCTCTTCCTC CAGAAAGTAC TTATAAATAT GTAGAAGCAA AAATAAAATC AAAAAATGAA
AAAAAAGCTT TTACAGATAA ATGGATTGGT AATAAAAATT TTTCTAAAGG AGAAAGAGAT
AATATCGTAA TGAAATTGTG TTTTGGTAAT GAAAAAGAAC CAGATTTCTT TCTTAGAAAT
AATAATTTTG ATCAATTATC ATACAGATTA TATGGTCCTC TAATTAAAGC ATTAAAGAAA
TAA
 
Protein sequence
MLNLYKSNKI EVISELLAEE LKICPPAINE KLEIVVPNYF FGNWLREQIT IKNKISALYE 
LKTISTYTES LLTNFFPAID MSAWNFESIK WGIVDSLEEL NSFKESFPLR NWINKYLDNK
KIIDGDIYSL TKKITNNFID YLIFRPEMIA QWNRYEINSS SLFKNLNSDQ FWQPILYKLL
EEKISEKPSC LYMIEVIKNL RKIKNLQFQV PNQIYIFSDN NLSKLHINFY SELSKFIKVN
LYLLSPGEDL WNRINCLEGE LEFDDNESKL NLNNTNIEKI FGKFGANFQK LIDENIYTEG
INLKNNLIYL DPTTNFNNKK DIPLLNQIQK RLIDNSTVDF TVSERDDSIL LCEHFNQNSQ
FEYLRKKIIE IINSCENIKY SDIAVLSPQT NLIKPYLRYI FNNELINGEK IPYFFIDDDN
NDSAGIYEFL IDITEIASEK ITLEKIDYIL SKKVTQNIFD FNITEKDEII FLLTQAGFHW
GLDDKERLGE EKNTLDWCIN RITLGLIYDK EVNLSNFNLK PFSYKNISLD LNKWVKILIH
LKKYINLIRG SFSYTNWVEK IKFILKSVAD SNANFNLEIS QINRILDNHA IPLIPDDLIL
LKVFREILIS CINKVKYQNK SRVNKILVSD IENSRHIPHK VIFLIDMNSV NYPKLPKSET
INLLKNKYHL GDPSVFEREK YAFLELLIAC RDKFIVTWVK NDKDNKKLDV SFPIKELISF
FDSFLNQSQR ELIIKDSDLN KNEIIDLDKC QIIKSNYSLI EDINWNEKKS DIKNYKLSEL
IYWFKNPQKY WLNKNNISPN EIFIHHPDEE YVSNLQKSQL ITKIIQQIEI DKHNIIDDLN
ELNINDQLAE NGIIMPKNSI FTKEKEIKDL LSSLAASLSQ HNKINKIYVK LNANKEEYLI
ADETVIELIN AKLSLSSLTE AWIKLLFISS LKRNIKRSKV IFRTENNYKS QIIQSPGEAE
SNLILEDYIN IFKNYSEKCL PLPPESTYKY VEAKIKSKNE KKAFTDKWIG NKNFSKGERD
NIVMKLCFGN EKEPDFFLRN NNFDQLSYRL YGPLIKALKK