Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_12091 |
Symbol | recD |
ID | 4911565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1023406 |
End bp | 1025109 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 640160796 |
Product | exodeoxyribonuclease V 67 kD polypeptide |
Protein accession | YP_001091433 |
Protein GI | 126696547 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA CTTCCACTGA TATTGAAAAG TTCCAATACG ATCATATATT TAATTTAATT TTAGGTATTT TCAAATTTAG TGAAAAAAAA TATGGAAATT TCGTAAAAGA TGTAATAAGA ATTTTATTAG AGTTTGAAAA AAATGGTGAA ACTATTATTG ATGTTGATAA TAGTTTAATA ATCTTTGAAT TATTAGAGGA TGGCTGGCCC AATAAACATA TAGATGTTTT AAAAAATTTA GGTTTGATTG GTTCCCTTGA TTCTCCATTC GTATTAGTAA ATAGAAAATT ATCCTTATCA AAATGGTCAA AAAAGATAGA AAGAGTTATT AATTTATTTA TAAAAAAAAT AGATACCGAT AATTTAATGA ACTCAATAAT TTATAAAGAT GATAATAAAA TTGATCAAAT TAAAAATATA TTTAAATATT CAAACTTAGT TTTCCTTCAA GGAGGACCAG GCACGGGTAA AACCACTTTA ATAATAAAGT TAATACTAGA ACTGCTTCAA ATTGATAACT TTTTAAATAT TGGTTTGTCT GCTCCAACTG GTAAAGCTAC AGCTCGTTTA AAAGAAGCCC TTAATGATAA AAAAAATATT TCCTTTAGCA AATTTCTAGA TCAGATAGAA TTTCAAACTT TACATAGATG GATTTTAAAT TCTAAAAATA AATCTCTTAC TTTGAAATTT AAACTAAAAG AGCTTGATAT TTTTATAATT GATGAAATGT CAATGGTTAA TATCGATTTG ATTGAATCAG TTTTAAATTT GCTAGCAAAG GATTGTAAAA TTATTTTAGT TGGTGATAAA AATCAATTGT CTCCAGTAAA TAACTGTTCT ATATGGAATT ATTTGTTTGA ATATTCCGAC AATAGTTCAA TTAAATCTTG TGTAGTAAAT TTAGAAAAAA CTTATAGAAA CATTGGAGAT ATAGCATTAA TTAGTAGTTT AATATTTAAT AATGATTTTT CTTTACTTAA TCAAAAGATA AAAGAATTAG AAAAAGATAA TAATTCAAAA GAAATTACTA TTTCAAAGAG TAGAAAAAAA GATATTCCAA AAGATCTATT ATTTTCGATT ACAAGTCATC TAAAACAGTT AAATATTTCA ACTTCAAATT TAAGTAAAAA AAAATATATA TTTGATAAGT GTATTGATAA TTTGTTGCTT AATGAAAAAG ATTTAGTAGA TAAGATATTT CTGGATTTAC AAAGTCACTT AATTTTATGC GAAAAAAATT CCGGAATATG GAGTGTTGAA TATTTGAATG AAATTGTTTT TGGTCAAAAA AAACCCTATG ACCTTAAAAC TCTTAAAGAG GGTATTCCGA TCATGTGTAC AAAAAATAAT AATGAACTAG GATTGTCAAA TGGGGATATC GGAGTACTTA TAGGTTTAGA AAATAAAAGA AAATATCTTT TTAGAAAATT TAATGATAAT AACGAAGAAA TTGTCACATT AATTGATCCA TCTAATTTAG AAAATGTTGT ACCAGCAATA GCCATTACTA TTCATAAATC TCAAGGAAGT GAATCTGAAA AAGTAAACAT TTTGTGGTCC CAAAACTATA GAAGAAATCA ATATGCTGTA AAAGAAAAAA AAGATAGTCA AAATAGCTTT TGCAGAGATA ATTTTGAAAG AAGGTTATTT TATACTGCTG TTACAAGAGC GAAAAAATCT TTAAATATAT ATTATTTAAA TTAA
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Protein sequence | MTKTSTDIEK FQYDHIFNLI LGIFKFSEKK YGNFVKDVIR ILLEFEKNGE TIIDVDNSLI IFELLEDGWP NKHIDVLKNL GLIGSLDSPF VLVNRKLSLS KWSKKIERVI NLFIKKIDTD NLMNSIIYKD DNKIDQIKNI FKYSNLVFLQ GGPGTGKTTL IIKLILELLQ IDNFLNIGLS APTGKATARL KEALNDKKNI SFSKFLDQIE FQTLHRWILN SKNKSLTLKF KLKELDIFII DEMSMVNIDL IESVLNLLAK DCKIILVGDK NQLSPVNNCS IWNYLFEYSD NSSIKSCVVN LEKTYRNIGD IALISSLIFN NDFSLLNQKI KELEKDNNSK EITISKSRKK DIPKDLLFSI TSHLKQLNIS TSNLSKKKYI FDKCIDNLLL NEKDLVDKIF LDLQSHLILC EKNSGIWSVE YLNEIVFGQK KPYDLKTLKE GIPIMCTKNN NELGLSNGDI GVLIGLENKR KYLFRKFNDN NEEIVTLIDP SNLENVVPAI AITIHKSQGS ESEKVNILWS QNYRRNQYAV KEKKDSQNSF CRDNFERRLF YTAVTRAKKS LNIYYLN
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