Gene P9301_08851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_08851 
SymbollivH 
ID4911232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp760850 
End bp762004 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content36% 
IMG OID640160467 
Productputative urea ABC transporter 
Protein accessionYP_001091109 
Protein GI126696223 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID[TIGR03409] urea ABC transporter, permease protein UrtB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.527406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTAC TTCTCGACAG TCTTTTTAAT GGTGTTGCGA TCGGATCTGT ACTACTTGTT 
GCTGCATTAG GTCTAGCGAT TGTATTCGGT CTTATGGGTG TTATTAATCT TGCCCATGGA
GAACTTATGA TGCTTGGAGC TTACACAACA TACGTTACAC AATTAATTTT CAAATTACCT
GTATTAAAGC CCTTCTACAA TTCATACATA ATAGTTTCAA TTTTCCTTGC TTTTATTGTT
AGTGGAGTTG TAGGCATTCT TCTGGAAAAA ACTATAATAA GGAAGCTTTA TGGAAGTCCA
CTAGAAACTC TTCTCGCCAC TTGGGGAGTT AGCTTAATTC TTCAACAATT TGTCAGAAGT
GTGCCATTGG CTTATGGGAC CGGTCTAGTT ATAAGTCTTA TAGTTGGTTT ATTTTTACCA
ACAACGTTTC CTCCAAAAAT AAAAGAATCA ATAAATTTTA AATATTTTAA ATTTAGTTCT
TGGATATTAG CTGCTTTAAC AGGGGTTCTT ACCGGTGGCG TTATTTCATC CACAGTAAGC
AAACTAAGTA GAGCGAGTGC TCGTAATGTT GATGTAACAG CTCCTTCATG GATGAGAGGT
CAAGTAGAAA TTTTAGGAAC TGCATTTCCT AAAACAAGAT TAATGATAAT TGTAATTACA
CTTATCTCTG TAATAGCAAT AACATTATTT CTAAACCAAA GTGCTTGGGG GATGCGTATT
AGAGCAGTTA CTCAGAACAG ACAAATGAGT GACTGCCTTG GTATATCTAC TGAAAAAGTG
GATATAATCA CTTTCGGGAT AGGATCTGGC TTAGCAGGAG TTGCTGGAGT AGCAGTGTCA
CTATTAGGTT CTGTAGGACC AAATGTTGGC GGAAATTATA TAGTAGGTTG TTTTATGGTT
GTAGTACTTG GAGGAGTGGG TAATTTATTA GGTACAGTAC TTGCTTCCTT TGGAATAGGA
ATAATGACGG ATTTAATTGG AGCTGGAAGG CTCTTATCAA TATGGCCTGA TATGCCTTTA
CCACTCTCAA ACACAATCAA CTTTTTTGCC ACAACAAGTA TGGCAAGAGT AATGATATTT
GCACTAATAG TTATATTCTT GCAATTTAAA CCAACAGGTT TATTTCCACA AAAAGGCAGG
ATGGTGGAAA ACTAA
 
Protein sequence
MELLLDSLFN GVAIGSVLLV AALGLAIVFG LMGVINLAHG ELMMLGAYTT YVTQLIFKLP 
VLKPFYNSYI IVSIFLAFIV SGVVGILLEK TIIRKLYGSP LETLLATWGV SLILQQFVRS
VPLAYGTGLV ISLIVGLFLP TTFPPKIKES INFKYFKFSS WILAALTGVL TGGVISSTVS
KLSRASARNV DVTAPSWMRG QVEILGTAFP KTRLMIIVIT LISVIAITLF LNQSAWGMRI
RAVTQNRQMS DCLGISTEKV DIITFGIGSG LAGVAGVAVS LLGSVGPNVG GNYIVGCFMV
VVLGGVGNLL GTVLASFGIG IMTDLIGAGR LLSIWPDMPL PLSNTINFFA TTSMARVMIF
ALIVIFLQFK PTGLFPQKGR MVEN