Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_08831 |
Symbol | urtD |
ID | 4911230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 758978 |
End bp | 759727 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640160465 |
Product | putative ATP binding subunit of urea ABC transport system |
Protein accession | YP_001091107 |
Protein GI | 126696221 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA AAGTTCTTCT GAATTTAATA GATATTACTG TTAGTTTCGA GGGTTTTTTA GCTCTCAACA AACTTAATTT AAATTTAAAG AAAGGTGAAT TAAGAGCTGT AATAGGACCC AACGGGGCAG GTAAAACCAC ATTTCTTGAT GTAATAACTG GAAAGGTTAA GCCAACAAAA GGTGAAGTAA TTTTTAAAGG AAAATCTTTA CTAGGTAGAA AGGAACATAA GATTGCTCGA CTTGGAGTGG GAAGAAAGTT CCAAAGTCCA AGAATCTTTG AAAATCTAAC AGTACAAGAA AACCTTGAAA TATCAGTGTC AACACCTAAA AGTCCCTTAA ACCTTATAAA TAAAAATATT AAGGATGAGC AGCTTAATGA GATTGAACGT CTTATGAAGA TTGTCAATTT AGCTCAAAAA GTTGATTCTA AAGCTGGTTC TTTATCACAT GGTCAAAAAC AATGGCTCGA GATAGCCATG TTAGTAGGAC AGAAGCCAGA TTTAATGTTA GTTGATGAAC CTGTTGCTGG TTTAACTGAT GAAGAAACTG ATCTTACTGC TGATTTATTA AAATCATTAT CAGGAGAAAA TACCGTAGTG GTAATAGATC ACGATATGGA ATTTATAAGA AGACTTGATA GTAATGTTTC AGTATTAAAT CAAGGCACAG TATTATGCGA GGGGACAATG GAAACTATAC AAAAGGATCA AAAAGTTATT GATGTTTATC TAGGAAGGCC GGAGAATTAG
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Protein sequence | MNNKVLLNLI DITVSFEGFL ALNKLNLNLK KGELRAVIGP NGAGKTTFLD VITGKVKPTK GEVIFKGKSL LGRKEHKIAR LGVGRKFQSP RIFENLTVQE NLEISVSTPK SPLNLINKNI KDEQLNEIER LMKIVNLAQK VDSKAGSLSH GQKQWLEIAM LVGQKPDLML VDEPVAGLTD EETDLTADLL KSLSGENTVV VIDHDMEFIR RLDSNVSVLN QGTVLCEGTM ETIQKDQKVI DVYLGRPEN
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