Gene P9211_18431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_18431 
SymbolrpsF 
ID5731755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1675301 
End bp1675819 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content36% 
IMG OID641286230 
Product30S ribosomal protein S6 
Protein accessionYP_001551728 
Protein GI159904384 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.800944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC AGCCTTACTA CGAAACCATG TATATTCTCC GGCCTACTAT CCCGGAGGAT 
GAAGTTGACA GTCATCTCAA AAAATATACT GAGATACTAG AAAGTGCAGG CGGAGAAGTA
CTAGATAGCC AAATGAGAGG GAAAAGGCGG CTAGCCTACC CAATTGGAAA ACATAAAGAA
GGAATTTATG TTCAATTAAG TCATCAAGGG GATGGACAGC ATATCGCTGT ATTAGAAAAA
GCAATGCGAC TTACGGAAGA TGTAATACGT TATTTAACCG TAAAGCAAGA TGGGCCTTTG
CCTGCAAAAA GAGTTGTTAA GACAAGTGAA AAAAATGTCA AAGAAGATAA GGAAGTTGAA
AACAAGGAGA CTACAACCGA GGATAAAGAC CAAAAAGGAG ATTTAAAAGA AACTAAGAAA
AGTGAAAATA AAGACTCTGT AACAGAAGCT GAAGGTCAAA AAGATATAAA AGAAGCTAAG
GAAATTGAAA ACAAGGAAAT CGAAAAAAAA GAAGATTAA
 
Protein sequence
MTNQPYYETM YILRPTIPED EVDSHLKKYT EILESAGGEV LDSQMRGKRR LAYPIGKHKE 
GIYVQLSHQG DGQHIAVLEK AMRLTEDVIR YLTVKQDGPL PAKRVVKTSE KNVKEDKEVE
NKETTTEDKD QKGDLKETKK SENKDSVTEA EGQKDIKEAK EIENKEIEKK ED