Gene P9211_13821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_13821 
SymbolpyrF 
ID5730782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1248598 
End bp1249323 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content41% 
IMG OID641285758 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001551267 
Protein GI159903923 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAG TTAACCCATC AGAAAAATTA ATTCTCGCTT TAGACGGCAT GGATGTTTTA 
GAAGCTTTGT CTTTCATTGA TAAAGTTCCT GACTTGATTT GGGTTAAGGT TGGCTTGGAA
TTATTTGCAA CAAGTGGCCT GGAAATCTTT ACCGAACTTC GGGCCAGGGG AAAAAAAGTT
TTTCTTGATC TGAAGTTCCA TGATATTCCT AATACTATGG CTGGGGCATG TTATCGAGCA
GCAAGGAATG GTGCAGAGTT AATTACAGTG CATGCTTGCG CAGGTAGCAA AGCTCTTTTA
GTAGCCAATG AAGCTGCTAA GAAAGGAGCC GCTTCGGTGG GCTTACCATC TCCAACATTG
TTGGGAGTTA CTGTTTTAAC AAGTTGGACG TCCTATGAAT TTGGTGATGA GCTAGACATT
CATCACTCTT TAGAGAAAAG GGTAGAGCAC TTGGCTCAAT TGGCCTTCAA AGCTGGCCTA
GGAGGCTGTA TCTGTTCACC TTGCGAGGTA AAAAGATTAA GAGAAATTTT CCCTGAATCG
TTCGAACTAA TAACCCCTGG TATTCGCTTC TTAGATAGTG GATTAGATGA TCAAGCAAGA
GTTATGCAAC CAAGAGACGC ATTCACTTCT GGTGCTTCAC GATTGGTTTT AGGAAGAATA
ATTACTCGAT CTACTAATCC TGCTGAGGCC TTTACAAGGG TTTGTAGAGA CATACAAACA
GATTAA
 
Protein sequence
MTLVNPSEKL ILALDGMDVL EALSFIDKVP DLIWVKVGLE LFATSGLEIF TELRARGKKV 
FLDLKFHDIP NTMAGACYRA ARNGAELITV HACAGSKALL VANEAAKKGA ASVGLPSPTL
LGVTVLTSWT SYEFGDELDI HHSLEKRVEH LAQLAFKAGL GGCICSPCEV KRLREIFPES
FELITPGIRF LDSGLDDQAR VMQPRDAFTS GASRLVLGRI ITRSTNPAEA FTRVCRDIQT
D