Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_13821 |
Symbol | pyrF |
ID | 5730782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1248598 |
End bp | 1249323 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641285758 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001551267 |
Protein GI | 159903923 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTTAG TTAACCCATC AGAAAAATTA ATTCTCGCTT TAGACGGCAT GGATGTTTTA GAAGCTTTGT CTTTCATTGA TAAAGTTCCT GACTTGATTT GGGTTAAGGT TGGCTTGGAA TTATTTGCAA CAAGTGGCCT GGAAATCTTT ACCGAACTTC GGGCCAGGGG AAAAAAAGTT TTTCTTGATC TGAAGTTCCA TGATATTCCT AATACTATGG CTGGGGCATG TTATCGAGCA GCAAGGAATG GTGCAGAGTT AATTACAGTG CATGCTTGCG CAGGTAGCAA AGCTCTTTTA GTAGCCAATG AAGCTGCTAA GAAAGGAGCC GCTTCGGTGG GCTTACCATC TCCAACATTG TTGGGAGTTA CTGTTTTAAC AAGTTGGACG TCCTATGAAT TTGGTGATGA GCTAGACATT CATCACTCTT TAGAGAAAAG GGTAGAGCAC TTGGCTCAAT TGGCCTTCAA AGCTGGCCTA GGAGGCTGTA TCTGTTCACC TTGCGAGGTA AAAAGATTAA GAGAAATTTT CCCTGAATCG TTCGAACTAA TAACCCCTGG TATTCGCTTC TTAGATAGTG GATTAGATGA TCAAGCAAGA GTTATGCAAC CAAGAGACGC ATTCACTTCT GGTGCTTCAC GATTGGTTTT AGGAAGAATA ATTACTCGAT CTACTAATCC TGCTGAGGCC TTTACAAGGG TTTGTAGAGA CATACAAACA GATTAA
|
Protein sequence | MTLVNPSEKL ILALDGMDVL EALSFIDKVP DLIWVKVGLE LFATSGLEIF TELRARGKKV FLDLKFHDIP NTMAGACYRA ARNGAELITV HACAGSKALL VANEAAKKGA ASVGLPSPTL LGVTVLTSWT SYEFGDELDI HHSLEKRVEH LAQLAFKAGL GGCICSPCEV KRLREIFPES FELITPGIRF LDSGLDDQAR VMQPRDAFTS GASRLVLGRI ITRSTNPAEA FTRVCRDIQT D
|
| |