| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_09161 |
|---|
| Symbol | ubiX |
|---|
| ID | 5730346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 811973 |
|---|
| End bp | 812575 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641285282 |
|---|
| Product | aromatic acid decarboxylase |
|---|
| Protein accession | YP_001550801 |
|---|
| Protein GI | 159903457 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
|---|
| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.190487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000772009 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA TCGTTCTTGC TGTTACAGGA GCCTCGGCTC AACCTATAGC TGAAAGGTCT
TTAGAACTTC TTTTAAAGAA TAATCTAGAG GTTCACTTAA TTTTAAGTAA GGGAGCTTAT
AAAGTCTGGG ATGCAGAGGC AAATACAAAG ATTCCTTTCG ATCCAGCTAG CCAAGAGAAG
TTCTGGAGGA ATAGATTAAA GATAAATTCA GGTAAACTAA ATTGTTATAA ATGGAATGAT
AATTCAGCAA GTATTGCCAG CGGAAGTGTA CATACTGATG GGATGATTAT TGTTCCATGT
ACTATGGGGA CTATTGGACG AATCTCTAAC GGATTTGCCT TAGACTTAAT TGAAAGATGT
GCGGATGTTC ACTTGAAAGA ACTCCGAAAA CTTGTTATTT CTCCAAGGGA AAGTCCTTTC
AATTTAATAC ATCTAAGAAA CATGACTAAG TTAGCTGAGG CCGGGGCACA CATAGTTCCT
TGTATTCCAG CATGGTACGG ATCACCTAAT TCTCTAGAGG ACATGATTAA CTTTCTAGTC
GTTAGACTTT TTGATTCTTT TAACCTTGAT CTTTTAAAGA TCAAGCGGTG GAAGGATTAT
TAG
|
|---|
| Protein sequence | MTKIVLAVTG ASAQPIAERS LELLLKNNLE VHLILSKGAY KVWDAEANTK IPFDPASQEK
FWRNRLKINS GKLNCYKWND NSASIASGSV HTDGMIIVPC TMGTIGRISN GFALDLIERC
ADVHLKELRK LVISPRESPF NLIHLRNMTK LAEAGAHIVP CIPAWYGSPN SLEDMINFLV
VRLFDSFNLD LLKIKRWKDY
|
|---|
| |