Gene P9211_08821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_08821 
SymboluvrC 
ID5730281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp776572 
End bp778515 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content34% 
IMG OID641285247 
Productexcinuclease ABC subunit C 
Protein accessionYP_001550767 
Protein GI159903423 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000233595 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCCAATAA TAGAATCTAG TCAATCACTG TTACTTGATA AAGATAAATT AAAGAGAATT 
CTATTAACTA TTCCCTCAGA ACCAGGTTGT TATTTAATGA GAGATAAGAA TGAAACTCTC
TTATATATAG GAAAGTCAAA AAGTCTTAAA TCTCGAGTTA GATCTTATTT TAATACTAAT
AACACTGCCT TGTCACCTAG GATATCCTTA ATGGTAAGAC AGGTTTATGA TATCGAGTTT
ATTTTAACTG ATAGTGATTC TGAAGCATTA AATCTTGAGT CAAATTTAAT AAAGGAGCAT
CAGCCATACT TTAATATTTT ATTAAAAGAT GACAAAAAAT ATCCCTATCT ATGTATTACA
TGGAGCGAAG AATATCCAAG AATCTTTATT ACTAGGAGGA GAAGGTTACG CAATAGCGAA
GATCGCTACT ATGGTCCTTA TGTAGACGTC ACACTTCTTC GGAAGACACT ATTCTTATTA
AAAAAATTGT TCCCATTAAG GCAAAGACCT AGAGCTTTAT ACAAAGATAG AACATGTTTA
AATTACTCTA TTAACAGGTG CCCTGGAGTT TGTCAGCGAC TTATTGAACC TGATGATTAT
CACAAGACAT TGAAGAAAGT AGCTATGATA TTCGAAGGAA GGACAGATCA ATTAAAAGAC
TTATTACATA AGCAGATGCT AATACAATCT AAGTTACAAG AGTTTGAAAA AGCAGCCATA
ATAAGAGATC AGATAAAAGG TATTGAGCAA CTTTATGCAG CCCAAAAAAT GACTATTCCT
GACTCAACTG TAAGTAGAGA TGTATTAGGA TTGTCAATAG ATAGTAATGT TTGTTGTGTC
CAGTTATTTC AAATGCGTGC GGGTAAGTTA GTAGGTAGGA TTGGTTTTGT CTATAATTCT
CTAGAATTAA GAAGTGAATT AATTTTACAA AAGGTATTGG AAGAATATTA TAGCCAAATA
GATAATGTCA CAATACCCCC GGAAATTCTT TTGCAAAGTA GTATCCCTCA ACAGTCATAT
TTTGAGCAAT GGTTAAGTGA ACTTAGAGGT TCTCAGGTTA AGATTGTTAT TCCTAAGAGA
AAAGAGAAAG CAGAATTAGT TAAGCTTGTT AAGCGCAATG CAGATATAGA ATTAGAAAGA
GTAAAAGATG GTCAATCAAA ACATCTAATA GAGCTTGAGG ACTTAACTCA AGTTCTCGAT
TTAGCATTTG TTCCTAGAAG AATAGAAGGC TATGATATCA GCCATTTGGC TGGGACTGAA
GTCGTAGGCT CACAGGTGGT ATTTATAGAA GGTATTCCTG CAAAGCAGCA TTATCGAAAA
TATGCAATTA AAAGCTCTTC AATAAGTAGC GGTCACAGTG ATGACTATAT GGCTCTTGCA
GAAGTTATTC GAAGGCGTTT TAGGCGCTGG TCTAAATATA AAGCTGATGG CCTAGACTTA
ACAGAATTAA GAAACAAAAA ACTTAGTTCA TTAGATCCTT TAATAATTAC TGATTGGCCA
GATCTTATTA TGATAGATGG AGGGAAGGGA CAGTTGAAAG CTGTTGAAGA GGCATTAAGG
CAGTTAGGCC TAGACTCTGA TATAAATGTC TGTTCTCTTG CTAAACGAAA TGAAGAAATC
TTTGTACCTG GATCTTACAA TAAACTAGAC ACAGAGAAAA ACCAACCAGG CCTATTACTG
TTAAGAAGAT TAAGAGATGA GGCTCACAGA TTTGCTATAA ATTTTCACAG AAAAAAGCGT
TCTTTATCTA TGAAACGTTC ACAATTAATT GATATCCCTG GTGTAGGTCC AAGACGTATT
AAGAGCTTAC TGGCACATTT TAAATCTGTT CAAGCAATTC AATTAGCTAC AGAAAAAGAA
ATCGCATCTG TGGAGGGATT AGGTACTGAA ACCGCTTCAA TTATTTTCAA ATATTTTAAT
CCTATAGAAA GGGATATTGT TTAA
 
Protein sequence
MPIIESSQSL LLDKDKLKRI LLTIPSEPGC YLMRDKNETL LYIGKSKSLK SRVRSYFNTN 
NTALSPRISL MVRQVYDIEF ILTDSDSEAL NLESNLIKEH QPYFNILLKD DKKYPYLCIT
WSEEYPRIFI TRRRRLRNSE DRYYGPYVDV TLLRKTLFLL KKLFPLRQRP RALYKDRTCL
NYSINRCPGV CQRLIEPDDY HKTLKKVAMI FEGRTDQLKD LLHKQMLIQS KLQEFEKAAI
IRDQIKGIEQ LYAAQKMTIP DSTVSRDVLG LSIDSNVCCV QLFQMRAGKL VGRIGFVYNS
LELRSELILQ KVLEEYYSQI DNVTIPPEIL LQSSIPQQSY FEQWLSELRG SQVKIVIPKR
KEKAELVKLV KRNADIELER VKDGQSKHLI ELEDLTQVLD LAFVPRRIEG YDISHLAGTE
VVGSQVVFIE GIPAKQHYRK YAIKSSSISS GHSDDYMALA EVIRRRFRRW SKYKADGLDL
TELRNKKLSS LDPLIITDWP DLIMIDGGKG QLKAVEEALR QLGLDSDINV CSLAKRNEEI
FVPGSYNKLD TEKNQPGLLL LRRLRDEAHR FAINFHRKKR SLSMKRSQLI DIPGVGPRRI
KSLLAHFKSV QAIQLATEKE IASVEGLGTE TASIIFKYFN PIERDIV