| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_03971 |
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| Symbol | deoC |
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| ID | 5730862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 372984 |
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| End bp | 373667 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641284754 |
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| Product | putative deoxyribose-phosphate aldolase |
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| Protein accession | YP_001550282 |
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| Protein GI | 159902938 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATCCA ACGATATCAA TACAAGCAAC GCGGAACTCT CTTCATTTAT TCACCAAGCT
GCACTAGACC CTCACTTACC TCTCGAGTCA CTTAATGAAA TTTGTGATGC CTCTAGGCAT
TTTAGTTTTT CAGGTCTTGT CACCAGCCTT ATTCGCATAT CTGCTGCAAG AAAACGACTA
GGGAAGAGTC AAACAACAAA ACTCATTACT GTAATTGGTT TCCCTTTTGG TGACATTCCA
CATAAAATCA AAAGTTTTCA AGCGGAATGG GCCGCAGAGC ATGGAGCAGA AGAATTAGAG
TTAGTCCCAA ATTTTCTTGC AATACATGAA AACAAAGTAG AAATATTTGC AGAAGAGATT
GCAGAAATAT GCAATATGGG TCTACCTACA AGAGTCATAC TTGACGCAGC AAGGCTTCCT
CAAGAAAAAC TTGCTGTAGC TGTAGAGGCA TGTATTGATG CAGGAGTTAG AGGCATTCAA
ACAGGTAGTG GCTTTGGCCC AAAAGTCTCA AATCCTTTAA TTGCTGAATT AACTGCTTTA
GTAAAAGGAA GATGTTCTCT AAAAGCTGTG GGTGGGATAA AAAAGATAGA TCAAGCGTTG
GAACTGATAG CTGCAGGAGC CACAGAAATC GGTACATCAT TAGGTCCAGA TTTAATGAAA
GAGCTTAAAA ACAAGAATCG ATGA
|
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| Protein sequence | MTSNDINTSN AELSSFIHQA ALDPHLPLES LNEICDASRH FSFSGLVTSL IRISAARKRL
GKSQTTKLIT VIGFPFGDIP HKIKSFQAEW AAEHGAEELE LVPNFLAIHE NKVEIFAEEI
AEICNMGLPT RVILDAARLP QEKLAVAVEA CIDAGVRGIQ TGSGFGPKVS NPLIAELTAL
VKGRCSLKAV GGIKKIDQAL ELIAAGATEI GTSLGPDLMK ELKNKNR
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