| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_01211 |
|---|
| Symbol | |
|---|
| ID | 5730788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 122061 |
|---|
| End bp | 122714 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641284464 |
|---|
| Product | RibD/RibG domain-containing protein |
|---|
| Protein accession | YP_001550006 |
|---|
| Protein GI | 159902662 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.450714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTTG TATTAGCTAT AAGCTTAGAT GGAAGGATAG GTTTTAGTGA TAAGCCAGGG
CAACATATTG GCGGCAAAGG AGACAGAGAT GTTTTAGAAC AAGCTTTAGC CTGGTCTGAT
GCAACATTAA TGGGTGCTGG TACATTAAGA GCACATAAAA ATACCTGTCT AATTAAGAAT
CCTAAATTAA TTAAACAACG TTCTTTTAAT AGAAAAGGCG CTCAGCCAAT TTGCATAGTA
GTTAGTAAAG AAGCAAATTT TATCCCTCAA TGGCCTTTTT TTGACCAACC GATTAGGCGT
TGGTTGTTAA CAAGAAAAAG AATTGAAACA TTAGACATAT GCTCAGCTTT ATTTGAGAAT
ATATTAGAAT TTGACAATAA TTTGACAGAG ACTTTAGCTA CACTAAAAAA GAAGGGTTTA
TCTAAAATAG TTCTTCTAGG TGGTCCAGAC TTGGTTGAAT CATTTTTAAT AGAAGACAAG
ATTAATGAAT TGCAAATTAC TATTATTCCT AAAGTATTAG GAGGTGAAAA ACTATGGGTA
AATTCTAATA ACCTTCCTAA TAACCTTACT AAATCAAATT CTTGGATATT AAAAAAAACA
GAATACTTAG AAGGAAATGA ATTAATGCTG CAGTATATAA GAAATTATGC TTAA
|
|---|
| Protein sequence | MKLVLAISLD GRIGFSDKPG QHIGGKGDRD VLEQALAWSD ATLMGAGTLR AHKNTCLIKN
PKLIKQRSFN RKGAQPICIV VSKEANFIPQ WPFFDQPIRR WLLTRKRIET LDICSALFEN
ILEFDNNLTE TLATLKKKGL SKIVLLGGPD LVESFLIEDK INELQITIIP KVLGGEKLWV
NSNNLPNNLT KSNSWILKKT EYLEGNELML QYIRNYA
|
|---|
| |