Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4633 |
Symbol | |
ID | 6206098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5953428 |
End bp | 5954894 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641694300 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_001821503 |
Protein GI | 182416437 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTG ACCTGCTCAG CTCCCTGTTT TCGAATCTCT GGTCGATCTT CCTCGTCATC GTTTTCTTCG GAGGGTCGAT CTTCGTCCAC GAGCTTGGCC ATTTCCTGGC CGCCCGTCGC CGCGGCGTGC ACGTCGAGCG TTTCTCCATC GGCTTCGGCC CGGCAATCTT TTCGTGGCGC GGTCGCGATG GCGTCGAATA CCGGATCTCG TGGATCCCGC TCGGCGGTTA TGTGTTGCTG CCGCAGCTGG CCGACCTGAG CGCGGTCGAA GGTAAAAGCG CAACCGACGT CAGCACGCTG CCGCCGATCA GCTACGCCAC CAAGATGCTC GTGTTCGTGG CCGGCGCGGC CTTCAACATC CTGTTCGCCT TCCTGCTTGC CATGATCGTG TGGGTGGTCG GCCAGCCGAC GATCGCCGTT TTCAACACGA CCACCATCGG TCACGTCGAA CCGACGATCA CCCTGGGCAC CGACAAAGTC GTGCCCAATC CCGCCGCCGA AGCCGGCCTG CAGCCGGGCG ACGTCGTGAA GTCGATCGAC GACCTGCCGG TGGGCGATTT CGAGGACATC ATGAACGCGG TTGTCCTCGG CAAGGAGCGT TCCGCCGACG GTCGCCGCGT CTCCAATTTC GTCATCGAGC GCGCCGGCCG GCAGCTGGCG ATCACGGTGC ACCCGCTGCT GCTCGGCGAT GACCAACTCC GCGTCGCCGG CGTGCAACCC GCCGAGGATC TCACCGCCGA CGCAGTCATG CCCGGTTCGC CAGCGGAAGC CGCCGGAGTT CGCCCCGGCG ATCGGATCGT CGCGGTCGAC GGTCGTCCCG TGTTCCGCCG CGTGACCGTG GCGAACCACC TCGCGCAGCA CCCGGATGGG CCGAGCGCGT TCGTGTTTCA GCGCGGCGAC GGCCGGGTCA CGCTGCAGAT CCAGCCGCGG CTGCAATCCG ACACGCCCGG CGCCACGCCC GTACCGCGCA TCGGCATTCA GTATCGCGAG CCGGTGATCG TGGTGCACCC GACGCCGTGG GCGCAGATTT CCGAGGATGT GCGCATGACG GTTCGCACGA TCTCGGCGCT GGTGAGCCCG AGCTCGGACA TCGGCGCCTC GAAGCTCAGC GGCCCCATCG GCATCGCGCG CGCGCTGCAT CAGCAGGCGC AGTGGGATAT TCGACGAGTG CTCTGGTTCA CCATTTTGGT GAACGTCAAC CTCGCGATCT TCAACCTGCT GCCGATCCCC GTGCTCGACG GCGGTCAGAT GCTGTTCGCC ACGATCAACC GGCTGCGCCG GCGCGAACTG CCCGCCAGCT TCATCATGGC GACGCAGAGC GCGTTCTTCG TCCTGATTTT CTCGCTGATC ATCTACGTCA GCTTCTTCGA TTTCCGCCGC TGGGCGCGTG ACCTGCAGAC CGACCGCGCG GAAGCCGCCG CCGCCGAGCG CGCCAAGGAC GCCACGCCGG CGCCGGCCAA GCCGTAG
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Protein sequence | MPTDLLSSLF SNLWSIFLVI VFFGGSIFVH ELGHFLAARR RGVHVERFSI GFGPAIFSWR GRDGVEYRIS WIPLGGYVLL PQLADLSAVE GKSATDVSTL PPISYATKML VFVAGAAFNI LFAFLLAMIV WVVGQPTIAV FNTTTIGHVE PTITLGTDKV VPNPAAEAGL QPGDVVKSID DLPVGDFEDI MNAVVLGKER SADGRRVSNF VIERAGRQLA ITVHPLLLGD DQLRVAGVQP AEDLTADAVM PGSPAEAAGV RPGDRIVAVD GRPVFRRVTV ANHLAQHPDG PSAFVFQRGD GRVTLQIQPR LQSDTPGATP VPRIGIQYRE PVIVVHPTPW AQISEDVRMT VRTISALVSP SSDIGASKLS GPIGIARALH QQAQWDIRRV LWFTILVNVN LAIFNLLPIP VLDGGQMLFA TINRLRRREL PASFIMATQS AFFVLIFSLI IYVSFFDFRR WARDLQTDRA EAAAAERAKD ATPAPAKP
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