| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4277 |
|---|
| Symbol | |
|---|
| ID | 6208157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5536328 |
|---|
| End bp | 5537359 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641693945 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001821150 |
|---|
| Protein GI | 182416084 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCAGC CAGCCACGCT CGAGGACGTT GCCAAGGCCG CGGGAGTACA TCGCACCACG
GTCTCCCTTT CCCTGCGCAA CCACCCCCGC ATCCCCGAAC CGACGCGCGT GCGCGTGAAG
GCCATCGCGG ACCGGCTCGG TTATCGGATC AATCCGCTGG TGTCCGCGCT CATGCAGTCG
CGCCGCTCCG GCAAGCCGGT GAAGCACGCC GCGCTCGCCT ACGTGACGAA CTACCCGACC
CGCTACGGCT GGCGGCCCGA GCACCATGAC CGGCCGGACT TCTTCCCCGG CGCCGTGGAG
CGCGCGCGCG ATTTCGGCTA CAAGCTCGAG CACTTCTGGT TGGGCGAGCC AGGCATGACG
CCGCGGCGGT TTTGCGACAT GCTTTCCGCG CGCGGGATCA ATGGCCTCAT CATCGGTCGG
CTGCCGCCAG GCCAGCACTC GCTCGAACTC GACTGGGACC GTTTCTCCGC GGTGGCACTC
GGCATGACGC TCCGCTCGCC GATTCTCCAT CACATCACCG AGAATCATTT CGACACCGTG
TGGCAGGCGA TGGACCGCTG CCGTGAGCGC GGCTACAAAC GCCCCGGCTT CCTGTTCTCC
GATGTCAACG ACAGCCCGCG CGTCGGCCAT CGCTGGCTCG GCGCCTATCT CACGCAGCAG
ACCCAGTTCC CCGCGCGCGA CCGGCTGCCG GTTTGTCCGG GCAATCCCAC CAACGAAGAG
GATTTCCGCA CGTGGTTTCT GCGCCACGAA CCCGACGCGC TGCTGGTCAA CAATCCCAGC
CTGTTGATGC GCTGGCTGAG CGACCTCAAT CGCAACGTGC CGCGCGACGT CGGGGTGGTC
GCGCTCGAAC ATCGCCGTGA ACTGGAGTGC ACCGGCATCT ACTACGATCC CGCGAAGATC
GGCGGCCTTG CGGTCGAGAT GCTCGTCGGC CTGATGCACC GCAACGAAAC CGGGGTGCCG
TCGGTGCAGC ACGAGATTCT GCTCACCGGC GAATGGCGGG AAAACTGCAT GCTTCCGCCG
CGCACCGCCT GA
|
|---|
| Protein sequence | MQQPATLEDV AKAAGVHRTT VSLSLRNHPR IPEPTRVRVK AIADRLGYRI NPLVSALMQS
RRSGKPVKHA ALAYVTNYPT RYGWRPEHHD RPDFFPGAVE RARDFGYKLE HFWLGEPGMT
PRRFCDMLSA RGINGLIIGR LPPGQHSLEL DWDRFSAVAL GMTLRSPILH HITENHFDTV
WQAMDRCRER GYKRPGFLFS DVNDSPRVGH RWLGAYLTQQ TQFPARDRLP VCPGNPTNEE
DFRTWFLRHE PDALLVNNPS LLMRWLSDLN RNVPRDVGVV ALEHRRELEC TGIYYDPAKI
GGLAVEMLVG LMHRNETGVP SVQHEILLTG EWRENCMLPP RTA
|
|---|
| |