| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4227 |
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| Symbol | |
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| ID | 6206374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5451609 |
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| End bp | 5452865 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693895 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001821100 |
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| Protein GI | 182416034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.338662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.246211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCG AACAGCGAAC GCCGAAGGTC GAACATCGAA CCTCGCAATC CGCAAGCGGA
GTCTTGGGCG ACGAACCGCC AGATGTTGCT GCGCGGGGCG CTCGGACTTC GACGGTCGAT
GTTCAGCCCT CGCCGCCCGA TCGCGTCCGC CGGGCTGAAC TGGGCGCGAT CGCCCTTGTC
GCGCTGTTGC TGATCGTCGT TTTTCCGCTG CTCAACGCGC AGGGGCTCAT CAGCGATTTC
ACGCTGAACC TCTGGGCGAA GTATCTGTGC TACGCGCTGC TCGCGATTTC GGTGGATCTG
CTCTGGGGCT ACACCGGCCT GCTCAGCCTC GGTCAGGCGC TCTTCTTTAG CCTCGGTGGC
TACATGATGG GCATGTATCT GATGCGGATG ATCGGGGACC TCGGGCAGTA TCGAAAGCCG
ATCCCGGATT TTTTGGTTTT TCTCGGCTGG ACCGAGCTGC CCTCGTTCTG GAAGCCGTTC
GACCAATTCC CGTTTGCCGC GGCGATGGTG TTGCTGCTGC CGGGCGTGGT CGCGCTGGGA
TTCGGCTTTC TGGCGTTTCG CGCGCGGATC AAGGGCGTGT ATTTCTCGAT TCTCACGCAG
GCGCTGACCT ATGGCGCGTC GCTGGTGCTT TTTCGCAACG ACCTGCTGAT GGGCGGCAAC
AATGGATTCA CCGACTACAA GTTCATCCTC GGGCACGACC TGCGCAGCGC CGCCACGCAG
CGGGCGCTTT ACGTCGCGAC GGCCGTCGCG CTGGTGCTCG TGTTCCTCGG CTGCCGCTGG
CTGAGCCGGA CGAAATTCGG GCTGGTGCAG CGCGCCATTC GCGACGGCGA GAACCGCGTG
CTGTTCAGCG GTTATGCGGC CGGACATTTC AAGCTCTTCG TCTTCGTGGT GGCCGCGCTG
ATCGCCGCCG TCGGCGGCGC GCTCTACGTG CCGCAGGTGG GGATCATCAA TCCATCGGAA
ATGACGCCCG ACAAGTCGCT CGAGGCCGTG GTGTGGGTCG CGGTGGGCGG CCGTGGCACG
CTGGTCGGTC CCGTGGTGGG CGCGATCACC ATCAACGCGC TCAAGAGCTG GGCCACGCGC
GCGTATCCGG ATCTCTGGCT GCTGCTGCTC GGCGCGATGT TCATCCTCGT CGTGCTGTTT
CTCCCCGGCG GGATCGTGAG CGTGCCGGGG CGAATCCGGA CATGGTGGCG GCAGCGGCGC
CGCGGCCCGG CCGCAGCGCT CCCGCGCGTC GAAACTCCGG CCGTGTCGTC GTCATGA
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| Protein sequence | MNVEQRTPKV EHRTSQSASG VLGDEPPDVA ARGARTSTVD VQPSPPDRVR RAELGAIALV
ALLLIVVFPL LNAQGLISDF TLNLWAKYLC YALLAISVDL LWGYTGLLSL GQALFFSLGG
YMMGMYLMRM IGDLGQYRKP IPDFLVFLGW TELPSFWKPF DQFPFAAAMV LLLPGVVALG
FGFLAFRARI KGVYFSILTQ ALTYGASLVL FRNDLLMGGN NGFTDYKFIL GHDLRSAATQ
RALYVATAVA LVLVFLGCRW LSRTKFGLVQ RAIRDGENRV LFSGYAAGHF KLFVFVVAAL
IAAVGGALYV PQVGIINPSE MTPDKSLEAV VWVAVGGRGT LVGPVVGAIT INALKSWATR
AYPDLWLLLL GAMFILVVLF LPGGIVSVPG RIRTWWRQRR RGPAAALPRV ETPAVSSS
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