Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4216 |
Symbol | |
ID | 6207658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5440246 |
End bp | 5440734 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693884 |
Product | SecC motif-containing protein |
Protein accession | YP_001821089 |
Protein GI | 182416023 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.900488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.210806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACT GTCCTTGTGG CTCCGGTCTG AGTTTCGAAG CGTGTTGCGG CCCGATCATC GCGGGCGCGC CGGCCCCGAC GGCGGAAGCG TTGATGCGCT CGCGTTATAC CGCTTACGCG CGGCACGCGT TCGAACACCT GGAGCGGTCG CTGTCCGCTG CGCAGCGGAA AGACTATTCC GCCGACGATG CGAAACGCTG GTCGGAGCAA TCGGAGTGGT TGGGCCTGAG CATCCTGCAC ACCGAGAAAG GCGGGCCGGC GGACACCGAG GGGCTGGTCC GGTTCTCGGC GCGGTTCAAG TCCGACGGCC AGGAGCACGA GCATCTCGAG ACGGCGCTCT TCAGCCGGGA GGGCGGCAAC TGGGTTTATA CCGGCCAGCA GCCGGAAGTC GGCCACACGG TGCGGCGGGA AACGCCGAAG ATCGGTCGCA ACGACCCGTG TCCCTGCGGC AGTGGCAAGA AATACAAGAA GTGCTGCGGC GCCGCGTGA
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Protein sequence | MSDCPCGSGL SFEACCGPII AGAPAPTAEA LMRSRYTAYA RHAFEHLERS LSAAQRKDYS ADDAKRWSEQ SEWLGLSILH TEKGGPADTE GLVRFSARFK SDGQEHEHLE TALFSREGGN WVYTGQQPEV GHTVRRETPK IGRNDPCPCG SGKKYKKCCG AA
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