Gene Oter_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4216 
Symbol 
ID6207658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5440246 
End bp5440734 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID641693884 
ProductSecC motif-containing protein 
Protein accessionYP_001821089 
Protein GI182416023 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.900488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.210806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT GTCCTTGTGG CTCCGGTCTG AGTTTCGAAG CGTGTTGCGG CCCGATCATC 
GCGGGCGCGC CGGCCCCGAC GGCGGAAGCG TTGATGCGCT CGCGTTATAC CGCTTACGCG
CGGCACGCGT TCGAACACCT GGAGCGGTCG CTGTCCGCTG CGCAGCGGAA AGACTATTCC
GCCGACGATG CGAAACGCTG GTCGGAGCAA TCGGAGTGGT TGGGCCTGAG CATCCTGCAC
ACCGAGAAAG GCGGGCCGGC GGACACCGAG GGGCTGGTCC GGTTCTCGGC GCGGTTCAAG
TCCGACGGCC AGGAGCACGA GCATCTCGAG ACGGCGCTCT TCAGCCGGGA GGGCGGCAAC
TGGGTTTATA CCGGCCAGCA GCCGGAAGTC GGCCACACGG TGCGGCGGGA AACGCCGAAG
ATCGGTCGCA ACGACCCGTG TCCCTGCGGC AGTGGCAAGA AATACAAGAA GTGCTGCGGC
GCCGCGTGA
 
Protein sequence
MSDCPCGSGL SFEACCGPII AGAPAPTAEA LMRSRYTAYA RHAFEHLERS LSAAQRKDYS 
ADDAKRWSEQ SEWLGLSILH TEKGGPADTE GLVRFSARFK SDGQEHEHLE TALFSREGGN
WVYTGQQPEV GHTVRRETPK IGRNDPCPCG SGKKYKKCCG AA