Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4116 |
Symbol | |
ID | 6204279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5329364 |
End bp | 5330380 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693784 |
Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
Protein accession | YP_001820990 |
Protein GI | 182415924 |
COG category | [C] Energy production and conversion |
COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.890746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGGCC TGCGAAAATC TCCGTGGATC ATCCACTATG ACGCCTCGAG TTGCAATGGC TGCGACATCG AGACGCTCGC CTGCCTGACG CCGCTCTACG ACGTGGAGCG ACTCGGCGTG ATCAACACCG GCAATCCGAA GCACGCCGAC ATCTTCCTGG TGACCGGCGC CGTCAACGAG CAGAGCAAGG AAGTCATCCG TAACATCTAC CACCAGCTGC CCGAGCCGAA GGTCGTGGTC GCGATCGGCG TCTGCGCGTC GAGCGGCGGG ATTTTCCGCG ATTGCTACAA CATCGCCGGC GGCGTCGATC GCGTCATACC GGTCGATGTT TACGTGCCCG GCTGCGCCGC GCGGCCCGAG GCGATCATCG ACGGCGTGGT GCAGGCGCTC GGCGTGTTGG AGCGCAAGCA GAGCGAGATG AGCGCGCTCG CGAACTGCAT CGATCGGATT CTCTACCTGC GGGCGACGAA GGCGGACGCC GCCGAAATCC TCGTGCTGCA AAAGATCGCC TATCAAACGG AGATCGAGCT CTACGGCGAC GACAGCCTGC CGCCGATGCA GCAAACCCTC GAGGAGCTGG AGCACGATTT CGAGCACGTG CCGGTGAACG CGCCGTCGCT GCTGCCGGCC GACCGCGACC TCGCCGCGGC GCCCGCCGCA CCCGCTCGGA TCGTTTTCCT GAAGGCGGTA ATCAACGGGA AAATCATCGG CTCGATCCGC GGTTATCAGC TCGGCGACAC CGCTTATCTC AGCCGGATGA TCGTGCATCC GTACTTCCGT CGCCGCGGTG TCGGCCGGCG GTTGCTGCCG GAGATCGAGA AGGCGTTCCC CACGGCGCGC CGGTTCGAGG CGAACACCGG CCATCAGAGC AAGCGCAACC ACTACCAGCT CACGCAACTG GGCTACCGGC AGTTCAAGAC CGAGCCGCTC ACGCCCACGA TCACGCTCGT GTACTTCGAA AAACTGCGGC CGGCCGGGAC CAGCGGCTCT CGTCCGCCCA TCCTCGTCTC CAGCTAG
|
Protein sequence | MLGLRKSPWI IHYDASSCNG CDIETLACLT PLYDVERLGV INTGNPKHAD IFLVTGAVNE QSKEVIRNIY HQLPEPKVVV AIGVCASSGG IFRDCYNIAG GVDRVIPVDV YVPGCAARPE AIIDGVVQAL GVLERKQSEM SALANCIDRI LYLRATKADA AEILVLQKIA YQTEIELYGD DSLPPMQQTL EELEHDFEHV PVNAPSLLPA DRDLAAAPAA PARIVFLKAV INGKIIGSIR GYQLGDTAYL SRMIVHPYFR RRGVGRRLLP EIEKAFPTAR RFEANTGHQS KRNHYQLTQL GYRQFKTEPL TPTITLVYFE KLRPAGTSGS RPPILVSS
|
| |