| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4113 |
|---|
| Symbol | |
|---|
| ID | 6208350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5325158 |
|---|
| End bp | 5326240 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641693781 |
|---|
| Product | aIF-2BI family translation initiation factor |
|---|
| Protein accession | YP_001820987 |
|---|
| Protein GI | 182415921 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
|---|
| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGA TCTGGCTCGC TGCCGATGGG AGCGCGGTGG AAATCATCGA CCAGACCCGG
CTGCCGCATG GGTTCGCGAT CGCGCGACTC GAGACGCTGG CGGACGCCGC GCACGCGATC
CGCGCGATGC TCGTGCGCGG CGCGCCGCTG ATCGGCGCGA CGGCGGCGTG GGGGCTGTGG
CTGGCGCTGT GCCGCGACGC CACCGATGCG GCGCTGGCGC AGGCGCATGC GACCTTGCTG
GCGACGCGAC CCACCGCCGT GAACCTCCGC TGGGCGCTCG ATCGCGTGCG GGCGCGCGTG
GCGCCGTTGC CGGCAACCGA GCGCGCGGCC GCAGCGCGTG GACTCGCGAT CGCGATGTGC
GACGAGGATG TGGCGCTGAA TCGCGGCATC GCCTCGGCCG GACTGCCGCT GATCCGCGCG
ATCGCGGCGC GCAAGCGGCC CGACGAGCGG GTGAACATCC TCACGCACTG CAACGCGGGC
TGGCTCGCCG CCGTCGACGT CGGCACGGCG ACCGCGCCGA TCTACGCGGC GCATGATGCC
GGCCTTGCCG TGCACGTCTG GGTCGACGAG ACGCGGCCGC GCAACCAGGG CGCCAGCTTG
ACGGCGTGGG AACTCCTGAA TCACGGCGTG CCGCACACCG TGATCGCCGA CAACGCTGGC
GGTCACCTGA TGCAGCACGG ACACGTGGAC TTGGTGATCG TGGGCACCGA CCGCACCACC
GCGACCGGCG ACGTGGCGAA CAAGATCGGC ACCTACTTGA AGGCGCTCGC CGCGCACGAC
AATGGCGTGC CGTTTTACGT GGCCGCGCCG TCGCCGAGCA TCGATTGGAC GCTGCACGAT
GGGCGGCGGG AGATTCCGAT CGAGGAACGT GGCGCCGAGG AACTCGCGCA GATCACGGGC
CGCCTGGCCG ATGGCACGGT GGCTTCGGTG TCGGTGCTGC CGGCAGGCAG CGCCGCCGCG
AATCCGGCCT TCGACGTGAC GCCGGCGAGA CTCGTCACCG GCTTGATTAC GGAACGCGGC
GTGTGTTCTG CGACCGCCGA AGGGCTGCGG ACGCTGTTTC CCGGTCACGC GAGCAAACCG
TGA
|
|---|
| Protein sequence | MRTIWLAADG SAVEIIDQTR LPHGFAIARL ETLADAAHAI RAMLVRGAPL IGATAAWGLW
LALCRDATDA ALAQAHATLL ATRPTAVNLR WALDRVRARV APLPATERAA AARGLAIAMC
DEDVALNRGI ASAGLPLIRA IAARKRPDER VNILTHCNAG WLAAVDVGTA TAPIYAAHDA
GLAVHVWVDE TRPRNQGASL TAWELLNHGV PHTVIADNAG GHLMQHGHVD LVIVGTDRTT
ATGDVANKIG TYLKALAAHD NGVPFYVAAP SPSIDWTLHD GRREIPIEER GAEELAQITG
RLADGTVASV SVLPAGSAAA NPAFDVTPAR LVTGLITERG VCSATAEGLR TLFPGHASKP
|
|---|
| |