| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3998 |
|---|
| Symbol | |
|---|
| ID | 6205415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5189236 |
|---|
| End bp | 5189823 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641693666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820872 |
|---|
| Protein GI | 182415806 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.420489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCT CCGCCTTCCG ACCGTGTTCA CTGTCCGCTC GCCGCCTGTG GTGGACGGCG
TTACTGCTGG TCGCCGCGCC GCTGTCCGGC GCCGAAATGT CCTCGTCGCC ACTGGCGAAG
TCGATGGAGC AGGAGTTGAA CATCCTGGAG CACGATCTGG TGCCGTTGGC CGAAGCCATG
CCGCCAGCGC TGTATGATTT CGCACCCACG AGCGGAGAGT TCAAGGATGT GCGAACGTTC
GGCCAGCAGG TCATGCATGT GGCCACGAAC ATCTATGGCG CTGCGGGCAC CGTGCTCGGG
GAGAAACCGC CGGCCGCGAT GGGCGATGGC AACAATGGAC CGCAGGAACT CAAAACGAAG
GAGCAGATTC TCGGCTATCT CCGGGGCTCG ATGGACTACG CGCGTCGCGC CATGGCTTCG
TTGACCGTCG CAAACGCCAT GGACGAGGTG GATCCTGGCT GGGGCAAACA CAGCCGTTTG
TTCATGGCCA ACGTGGTGCT GTGGCACAGC TTTGACCACT ACGGGCAGAT GGTGATCTAC
GCTCGGCTGA ACGGGATCGT TCCGCCAGCC AGCCGGCCGA AGAAATAG
|
|---|
| Protein sequence | MEISAFRPCS LSARRLWWTA LLLVAAPLSG AEMSSSPLAK SMEQELNILE HDLVPLAEAM
PPALYDFAPT SGEFKDVRTF GQQVMHVATN IYGAAGTVLG EKPPAAMGDG NNGPQELKTK
EQILGYLRGS MDYARRAMAS LTVANAMDEV DPGWGKHSRL FMANVVLWHS FDHYGQMVIY
ARLNGIVPPA SRPKK
|
|---|
| |