| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3990 |
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| Symbol | |
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| ID | 6205448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5181922 |
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| End bp | 5182989 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693658 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001820864 |
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| Protein GI | 182415798 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC TGATCACCGG CGTGTGCGGC TTTGTCGGCA GCACGCTGGC GCGCGCGCTC
AGCGAAGCGG GCGGCTATGA AATCGTCGGT CTCGACAATT TCATCCGGCC CGGCAGCGAG
ACCAATCGCG ACGCGCTGAA GCGGCTAGGC GTGAAGTTGC ACCACGCCGA TCTTCGCGCT
GCCAGCGATC TCGAAGCGCT CCCGGCCGTC GACTGGGTCG TCGACGCCGC CGCCAATCCG
AGTGTGCTCG CCGGCGTGGA TCGCCGCACC AGCTCCCGCC AACTCGTGGA GCACAATCTC
GTCGGCACGG TGAACATGCT CGAGTTCTGC AAGCAGCACC GCGCCGGCTT CGTGCTGCTG
AGCACGAGCC GCGTGTATTC GATTCCTCCG CTGGCCAGCC TTGCGACCGA TGTGATCGAC
GGCGCATTCC ACCCCGCGAC CGGCGATCGG CCCACGGGTC TCACCGGCGC CGGCGTGAAC
GAAACATTTT CGACCGCCGC GCCGGTGTCG CTCTACGGCG CCACCAAGCT CGCCTCCGAA
GCGCTCGCGC TCGAATACGG CGAGACGTTC GACCTCCGAG TCTTCATCAA CCGCTGCGGC
GTGCTCGCGG GCGCCGGCCA GTTTGGCCGC GCCGATCAGG GGATCTTCGC CTTCTGGCTC
AACAGCCATC TCCGCCGCCG TCCACTGAGC TACATCGGAT TCGGCGGCCA CGGCTATCAG
GTACGCGATT GTCTGCACCC GCGCGATCTC GCGCCGCTGC TCGCAAAACA GTTCATCGCG
CCCAAGCTCT CCGCAGCCGA CCGGCTCGTG AATGTCTCCG GCGGCGTCGC GTCCGCGAGG
TCGCTGCGTC AGCTCACCGC CTGGTGTGAT GCGCAATTCG GGCCGCATCC GGTCGCCGCT
GATCACACGC CGCGGCCATT CGACATTCCG TGGATCGTGC TCGATCACGC CAAAGCCACG
CGGCTGTGGC ACTGGCAACC GCAGACGCCG GTCGCAGCCA TCCTCGAGGA GATTGCCGCG
CACGCCCGCG CCCACACCGA CTGGCTGGAC ATCTCGGCCC CGCTCTGA
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| Protein sequence | MKLLITGVCG FVGSTLARAL SEAGGYEIVG LDNFIRPGSE TNRDALKRLG VKLHHADLRA
ASDLEALPAV DWVVDAAANP SVLAGVDRRT SSRQLVEHNL VGTVNMLEFC KQHRAGFVLL
STSRVYSIPP LASLATDVID GAFHPATGDR PTGLTGAGVN ETFSTAAPVS LYGATKLASE
ALALEYGETF DLRVFINRCG VLAGAGQFGR ADQGIFAFWL NSHLRRRPLS YIGFGGHGYQ
VRDCLHPRDL APLLAKQFIA PKLSAADRLV NVSGGVASAR SLRQLTAWCD AQFGPHPVAA
DHTPRPFDIP WIVLDHAKAT RLWHWQPQTP VAAILEEIAA HARAHTDWLD ISAPL
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