| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3910 |
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| Symbol | |
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| ID | 6207036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5073395 |
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| End bp | 5075578 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693578 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_001820784 |
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| Protein GI | 182415718 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0454039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.623088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCC CAAACATCGC CGGCACGCTG CGCCGTTCGC TGCTCATCAA AGTCATCTCC
AAGCCGGCGC CCAGCCGCGA GGACGTGAGT TCGGTCATCG AGCTGACCTC GTCCAAGATC
GTCGAGGCGC TCCAGGCACA GTCGATGACC TTCTACCTGG TCGAGGGCAA TGACATCACC
TTCCGCAATG TCTATTACTC GCCGACGCTT TGGGCCAAGG ATCCCTCGCT CGAGAAAAAG
CTCCAGGAAA CCGCCGCCAC ACTGCTCGCG CTGAAACTGC CGCTCGGCAC CGGTATCGTC
GGCAAGGTGA TCGGCACCGG CGAACCCGTT TTCTTCCGCA ACACCGAGGA GCAGGCGCCG
CTCATGGCGT CGCTGGCCAA AACGACCGGC TTCGAGGTCC GCTCGATGCT CACCGTGCCG
CTCAAGACGA ACATCGTCAT CGGCGCGATC CAGGTGCTGA ACAAGGAACT CTCCGCCGGC
ACCGACGGCG CGTTCACCGA AAAGGACCTC ACGCTGCTCC GCGAGGTCGC GGAATACTCC
GCCACGCTGC TGCACCGGAT GCTGGATCCG AAGTTCCAGC TGAGCGCCGA CGATACCGCC
CGCTTCATCG CCAAGCTCAC CGATCTGCCG CTCGTCACCA AGCTCAGCGA ACTCGAGGTC
GACGACAAAC TCGTCGAGGT GATCGGCGAC GCGATCATCC GCCGCGAAGG CATCTTCCCG
CACAAGCGCG TCTCGCCGAA TTCGCTCTCG GTGCTGATGA CCAATCCGCT CGACTACGCG
AAGCGGGAGT CGTTCTCGCA GGCGACCGAG ATGAGCATCG ACGAGGTCGC GGTGATCTCG
GCCACGCAGT TCGACGAGCT GCTCCACAAG TATTTCAAGG CCGCCGCCAA CGCGCCGGCC
GCCGACATCG ACATCGGCTC GGTCGCCGAG GTGATCAGCA CCGCGTATTC GCCCGAAGGC
GGCAGCTCGG AGGTGAGCGC CGCGGATCTG GAGAAGGAGG ACTCCGCGCC CATCATCCAG
CTCACCAACC GGATCATCGA GGACGCCTAC GTTTCGGGCG CGTCCGATAT TCACATCGAG
CCGATGGAAA AGGACCTGCT CGTCCGCTAC CGGATCGACG GTCTCTGCCA GGAGAAGCTG
CGGCTGCCGA AGCAGGTCGC GAATGCGATG GTCACGCGCA TCAAGATCAT GTGCAACCTG
GACATCTCCG AGCGCCGGTT GCCGCAGGAC GGCCGCATCG TGTTCAAGAA ATACACGAAA
AAGAACATCG ACATCGACCT GCGCGTCGCG ACCGGCCCGA TGAACCACGG CGAAAAGGTG
GTCATGCGCA TCCTCGACAA GACCAAGAGC ACGCTGCCCC TGCCCGCGCT GGGTTTCTCC
GAGGAAAACC TCGCCAAGTA TCGCGAGTGC ATCCGCCAGC CCTACGGCAT GATCCTGCAC
TGCGGCCCCA CCGGCTCCGG CAAGTCGATG ACCCTCTACT CGGCGCTCGG CGAGATCAAC
GCGCCGGACA TCAACATTCA GACGGCCGAG GATCCGATCG AATACACGCT CGCCGGCATC
AACCAGATGC AGATGAGCCG GCAGATCGGG CTCACGTTCG AGCGGGCGCT GCGCTGCTAC
CTGCGCATGG ACCCCGACGT GATTCTCGTC GGCGAAATCC GCGACAGGGA AACCGCGCAG
ATCGCCGTCG AAGCCGCGCT CACCGGTCAC TTGCTGGTCT CGACGCTGCA CACCAACGAC
GCGCCGTCCA CGATCTCGCG CATCGGCGAG ATGGGCGTGG AGCCGTTCAA CATTTCCGCC
TCGCTTGTCT GCGTCTGCGC CCAGCGGCTG CTCCGCCGCG TGTGCAAAAA CTGCAAGGTG
CCCTACGAGC CGGAAGGCCG CGAAAAGGAC ATCATCGAGA AAGCGCTCGG CTGGAGCGGG
CCGATCTACA AAGCCAATCC GCGCGGCTGC CCCACCTGCG CGGGGCTCGG CTACAAGGGC
CGTGTCGGCA TCCACGAGTT GATGCTCAAC TCCGAGGAAC TCACCGAGGG CATCAACAAG
GAAATCGAGG TCGCCGCGCT GAAACGCATC GCGATGAAAA ACGGCATGAA GACGCTCCAC
CAGGACTCGA TGCTCAAGGT CAAGCAGGGG CTCACCACGA TCGAAGAAGC GCTCAGCAAC
GTGCCGCCGG ACCTCGTGCT GTAA
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| Protein sequence | MATPNIAGTL RRSLLIKVIS KPAPSREDVS SVIELTSSKI VEALQAQSMT FYLVEGNDIT
FRNVYYSPTL WAKDPSLEKK LQETAATLLA LKLPLGTGIV GKVIGTGEPV FFRNTEEQAP
LMASLAKTTG FEVRSMLTVP LKTNIVIGAI QVLNKELSAG TDGAFTEKDL TLLREVAEYS
ATLLHRMLDP KFQLSADDTA RFIAKLTDLP LVTKLSELEV DDKLVEVIGD AIIRREGIFP
HKRVSPNSLS VLMTNPLDYA KRESFSQATE MSIDEVAVIS ATQFDELLHK YFKAAANAPA
ADIDIGSVAE VISTAYSPEG GSSEVSAADL EKEDSAPIIQ LTNRIIEDAY VSGASDIHIE
PMEKDLLVRY RIDGLCQEKL RLPKQVANAM VTRIKIMCNL DISERRLPQD GRIVFKKYTK
KNIDIDLRVA TGPMNHGEKV VMRILDKTKS TLPLPALGFS EENLAKYREC IRQPYGMILH
CGPTGSGKSM TLYSALGEIN APDINIQTAE DPIEYTLAGI NQMQMSRQIG LTFERALRCY
LRMDPDVILV GEIRDRETAQ IAVEAALTGH LLVSTLHTND APSTISRIGE MGVEPFNISA
SLVCVCAQRL LRRVCKNCKV PYEPEGREKD IIEKALGWSG PIYKANPRGC PTCAGLGYKG
RVGIHELMLN SEELTEGINK EIEVAALKRI AMKNGMKTLH QDSMLKVKQG LTTIEEALSN
VPPDLVL
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