Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3844 |
Symbol | |
ID | 6205405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4994948 |
End bp | 4997191 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641693511 |
Product | 1,4-alpha-glucan branching enzyme |
Protein accession | YP_001820718 |
Protein GI | 182415652 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.964864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCAGG TTGCTGTCCG GGAACCTCTT CGTCGCGTGA TCATTTCCAA AACCGACTAT CTCGCCCTGC TGCAGGCCAG CCACACGTCA CCGCACGCGG TGCTCGGCAT GCATCCGAAG ACCTACAAGC ACACCAAGGG GCTGGTGGTG CGTGCGCTCG TGCGGCAGTC CGCCAGCTGC GCGGTGGTCG ATCCTGAGTC GGGCGAGACG TGGGCGATGA CCCCGATCGC GGACGAAGGA CTCTACGAAG TCTTCATTTC GAAGCGCGCG CAGGTGTTTC GCTATCAGCT GCGGGTGACG ACGCTCACCG GTGAGATGCG GCAGTTTTAC GACCCGTATT CGTTCCTGCC GACGCTGAGC GAGCACGACC TGTATCTCTT CAACGAAGGC AACGAGCACC GGATCTACGA CAAGCTCGGC GCGCACGTGC GGGTCATGAA CGACGTCGCC GGCGTTGCGT TTGCGGTGTG GGCGCCGGCG GCGAAGCAGG TCTCGCTGGT GGGGAACTTC AATCACTGGG ACGGCCGCTA TCACCAGATG CGGCCGCTCG GCTCGTCAGG CGTGTGGGAA ATTTTTATTC CCGGGCTGGA AGAGGGGGAA CTCTACAAGT ACGCCGTACG CGATGCGCAA GGCCACGTGC GGTTGAAGAC GGATCCGTAC GGCACCTACT TCGAAGGCCC GCCGAACAAC GCGTCGATCG TCTACGACAC GACGCAGTTC AAGTGGCACG ATCAGGAATG GCTCGAGCGG CGGCGCGCCA ACGCCGGCCA GCTCGATCAA CCCATGTCCG TCTACGAGGT TCACCTTGGA TCGTGGCGCC GCAAGCCAGA GGACGCCGGC CGGCCGCTCG ACTATCGGGA AGCGGCGACG CAGCTCGCCG ACTACGTCAC CGAGATGGGC TACACTCACG TGGAGTTCAT GCCGCTGGCG GAGCATCCGT TCACCGGCTC CTGGGGCTAT CAGGTCACCG GCTTCTATGC CCCGACGCAT CGGCACGGCG CACCGGAAGA TTTCGCCTGG CTGGTGGATC ATCTCCATCA GCGTGGCATT GGCGTAATCC TCGACTGGGT GCCCGCGCAT TTTCCGCGCG ACAGTTTCGC GTTGGCGGAG TTCGACGGCT CACATCTTTA CGAGCACGCC GATCCGCGCC TGGGCGCGCA CATGGATTGG GGCACGCTGA TCTTCAACTA TGGCCGCAAC GAGGTCCGCT GCTTCCTGCT GGCGAACGCG CTCGCGTGGA TCGAGCGCTA TCACATCGAC GGACTGCGCG TCGACGCCGT CGCTTCGATG CTCTATCTCG ACTACTCGCG CAAGGAAGGG CAGTGGATCC CGAATAAATT CGGCGGCCGT GAAAATTTGG AAGCGATCGA TTTCCTGCGC CGCGTGAACG ATCTCGTGCA TCAGTATCAT CCGGGCGCGC TCACCATCGC GGAGGAGAGC ACGTCCTTTC CGGGTGTGAC GAAGCCGACC AGCGAAGGCG GGCTCGGCTT CGACTACAAA TGGAACATGG GGTGGATGCA CGACACGCTG CGCTATTTCG CGAAGACGCC AATTCACCGG CAGTGGCACC AGAACGACCT CACCTTCGGC ATGCTGTACC AGTATGCGGA GAAATTCGTG ACGGTCTTCT CGCATGACGA GGTGGTGCAC GGAAAAGCCT CGATGCTCTT CAAGATGGGC GCGTGGCACA TTCCCGAGAA AGCGGCGAAC CTGCGCTCGC TCTACGGGCA CATGTGGGGC TATCCGGGCA AGAAGCTGCT CTTCATGGGA AGCGATTTCG CGCAGTCGCA CGAATGGAAC TACGACGCCA GTCTCGACTG GCATCTGTGC CAATACAAGG ACCACGAAGG CGTCCGGTTG CTTGTGCGCG ACCTCAACAA GCTCTACGCC AGCGAGCCCG TGCTGAGCAA AAACGACTAC AATCCCAAAG GGTTCCGGTG GGTTTCCTGC CAGGATGCGG CGGCCAATGT GCTCGCGTAT CTGCGCACGG ACGAAACGGA GCAGACCTCG TTCCTGGTCG TCGGTCATTT CTCCGGTGCC ACGCGGCCGT ATCGGATCGG CGTGCCGCGC GCGGGAATGT GGCGCGAGAT GATTAACACC AACAGCGAGT TTTACGGCGG CTCCGGGTTG GGCAACGATG GCGGCCGGCA TACGGAGGAC GTTCCGCACG ACGGTTGTCC GCACTCGCTC AGTCTGACGC TGCCGCCGCT CAGCACTACG ATCTTCAAGT GGACCGCGGC GTAG
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Protein sequence | MRQVAVREPL RRVIISKTDY LALLQASHTS PHAVLGMHPK TYKHTKGLVV RALVRQSASC AVVDPESGET WAMTPIADEG LYEVFISKRA QVFRYQLRVT TLTGEMRQFY DPYSFLPTLS EHDLYLFNEG NEHRIYDKLG AHVRVMNDVA GVAFAVWAPA AKQVSLVGNF NHWDGRYHQM RPLGSSGVWE IFIPGLEEGE LYKYAVRDAQ GHVRLKTDPY GTYFEGPPNN ASIVYDTTQF KWHDQEWLER RRANAGQLDQ PMSVYEVHLG SWRRKPEDAG RPLDYREAAT QLADYVTEMG YTHVEFMPLA EHPFTGSWGY QVTGFYAPTH RHGAPEDFAW LVDHLHQRGI GVILDWVPAH FPRDSFALAE FDGSHLYEHA DPRLGAHMDW GTLIFNYGRN EVRCFLLANA LAWIERYHID GLRVDAVASM LYLDYSRKEG QWIPNKFGGR ENLEAIDFLR RVNDLVHQYH PGALTIAEES TSFPGVTKPT SEGGLGFDYK WNMGWMHDTL RYFAKTPIHR QWHQNDLTFG MLYQYAEKFV TVFSHDEVVH GKASMLFKMG AWHIPEKAAN LRSLYGHMWG YPGKKLLFMG SDFAQSHEWN YDASLDWHLC QYKDHEGVRL LVRDLNKLYA SEPVLSKNDY NPKGFRWVSC QDAAANVLAY LRTDETEQTS FLVVGHFSGA TRPYRIGVPR AGMWREMINT NSEFYGGSGL GNDGGRHTED VPHDGCPHSL SLTLPPLSTT IFKWTAA
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