| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3805 |
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| Symbol | |
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| ID | 6205089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4943675 |
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| End bp | 4945663 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693473 |
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| Product | transketolase |
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| Protein accession | YP_001820680 |
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| Protein GI | 182415614 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.437191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCC AAACTCCCCT TCTCGCCAAG GCTGCCAATC AGGCGCGTGG ACTCGCCATC
GACGCGGTGC ACGCGTGCTC GTCGGGCCAC CTCGGGCTCC CGCTCGGAGC CGCCGAAATC
GGCGCCGTGC TTTACGGCCA TGCGCTGGTG CACAACCCGG AGCATCCGCG CTGGCTCAAC
CGCGATCGTT TCGTTCTCTC CGCCGGCCAC GGCAGCATGT TCCTCTACGC GTGGCTGCAC
CTGAGCGGCT ACGACATCCC GCTGGACGAG GTGAAGAAGT TCCGCGCGTT GCACAGCATC
ACGCCGGGGC ACCCGGAATT CCGCGAGACG CCCGGCGTCG AGGCGACGAC CGGCCCGCTG
GGGCAGGGGG TGGGCAACGC GGTCGGCATG GCGGTCGCCG GCCAGATGGC GGCGGCGCGG
TTCAACACGC CCGAGCACAC GGTTTTCGAC TATCATGTCG TTTGCCTCGC GGGCGACGGC
TGCATGCAGG AAGGCGTGGC GATGGAGGCC GTGGCGTTCG CCGGGCACCA GAAGCTCGAC
AACCTGATCC TGATTTACGA CTCGAACGAC GTGACGCTCG ACGCGATGGC GGTGAAGACG
CAGAGCGAGA ACGCCGCCGC GCGCTTCAAG GCCATCGGCT GGGACGTGCA GACGATCGAC
GGCCACGACA TGGCGGTGTT CCTGAAGGCC TTCAACAAGG CCAAGAAGGC AACGAGTGGA
AAACCGCAGC TGATCATCGC GAAGACGCAG ATCGCGCGCG GCATCCCGGA AGTCGCCGGC
ACGGCCAAGG GCCATGGCGA GGGCGGGGCA AAGTTCGCCG ACAGCGCGCG CGCCGGACTT
GGCTTGCCGG CCGACCAGCA CTTCTTCGTG AGCGACGACG TCCGCGCCTA TTTCGCGGAT
CATCTGAAAC GACTGCTCCG CCACTACAAG AAGTGGGAAA AGACGTTTGA GGCGTGGCGC
ACCGCTAATC CGGACAAGGC CGCGCTGCTC GACTCCGCGA AGAACGCGCC GAACGCGAGC
GCACTGCTCG CGAAGATCCC GGCGTTCCCG GCCGACGCCA AGCTCGCCAC GCGCGCGGCG
GGACGCGACG TGCTGCAGCC CGTCGCCGCG GAACTGCCGC TGCTGATCGG CGGCAGCGCC
GACCTCTACG GCTCGACGTT GAACCTCATC GCGGCGGACA AGGACTTTGA CCCGAGCAAT
CGCGGCGGCC GGAATATTCG CTTCGGCATT CGCGAGCACG GCATGGCCGC GATCGCGAAC
GGCATCGCTT ACGACGGGCT CTTCCGTCCG AGCGTGGCGA CGTTCCTCGT GTTTGCCGAC
TACTCGCGTC CGCCGATGCG GCTCGCGGCG CTATCGGATC TGCCCGTCGT CTACATCTAC
ACGCACGACT CGATCGGCGT CGGCGAAGAC GGCCCGACGC ACCAGCCGGT GGAGACGGTC
TCAGCGCTGC GCGTGATTCC GAACATGGAT GTGATCCGTC CGGCGGATCC GGAGGAAACC
GCCGGCGCGT TTGCTGCGGC GCTCGAACGG ACGGATGGGC CGACGCTGCT GGCGCTCACG
CGTCAGGCGC TGCCGATGCT GAACGACATT CCGGTGCAGA CGCGCCGCGA AGGCGTGCTC
AAGGGCGGCT ACGTGGCGAA GCAGGAAACG GCGGCGCTCA CCCACATCCT CATCGCGACG
GGCAGCGAAC TGCAGATCGC GCTCGCCGCG GCCAAGACGC TCGGTGCCGG CGTGCGCGTC
GTGTCGCTGC CGTCGTTCCA GCGATTTGAC CAGCAGTCGC CGGAGTATCG CGAGAGCGTG
CTGCCCGCCA GCTGCCGGAA GCGTGTCGCG GTCGAGGCGG GTGTGCCGGA CCTCTGGTAT
AAATACGTCG GCCTCGAGGG TAAGGTGGTG GGCATCGCCC GCTTTGGCCT GAGCGCTCCT
GGGCCGGTCG TGTTCAAGGA ACTCGGCATC ACCGCCGAAG CCGTCGTCGC TGCCGCTCAG
TCGCTGTAA
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| Protein sequence | MPLQTPLLAK AANQARGLAI DAVHACSSGH LGLPLGAAEI GAVLYGHALV HNPEHPRWLN
RDRFVLSAGH GSMFLYAWLH LSGYDIPLDE VKKFRALHSI TPGHPEFRET PGVEATTGPL
GQGVGNAVGM AVAGQMAAAR FNTPEHTVFD YHVVCLAGDG CMQEGVAMEA VAFAGHQKLD
NLILIYDSND VTLDAMAVKT QSENAAARFK AIGWDVQTID GHDMAVFLKA FNKAKKATSG
KPQLIIAKTQ IARGIPEVAG TAKGHGEGGA KFADSARAGL GLPADQHFFV SDDVRAYFAD
HLKRLLRHYK KWEKTFEAWR TANPDKAALL DSAKNAPNAS ALLAKIPAFP ADAKLATRAA
GRDVLQPVAA ELPLLIGGSA DLYGSTLNLI AADKDFDPSN RGGRNIRFGI REHGMAAIAN
GIAYDGLFRP SVATFLVFAD YSRPPMRLAA LSDLPVVYIY THDSIGVGED GPTHQPVETV
SALRVIPNMD VIRPADPEET AGAFAAALER TDGPTLLALT RQALPMLNDI PVQTRREGVL
KGGYVAKQET AALTHILIAT GSELQIALAA AKTLGAGVRV VSLPSFQRFD QQSPEYRESV
LPASCRKRVA VEAGVPDLWY KYVGLEGKVV GIARFGLSAP GPVVFKELGI TAEAVVAAAQ
SL
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