Gene Oter_3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3805 
Symbol 
ID6205089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4943675 
End bp4945663 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content67% 
IMG OID641693473 
Producttransketolase 
Protein accessionYP_001820680 
Protein GI182415614 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID[TIGR00232] transketolase, bacterial and yeast 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.437191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCC AAACTCCCCT TCTCGCCAAG GCTGCCAATC AGGCGCGTGG ACTCGCCATC 
GACGCGGTGC ACGCGTGCTC GTCGGGCCAC CTCGGGCTCC CGCTCGGAGC CGCCGAAATC
GGCGCCGTGC TTTACGGCCA TGCGCTGGTG CACAACCCGG AGCATCCGCG CTGGCTCAAC
CGCGATCGTT TCGTTCTCTC CGCCGGCCAC GGCAGCATGT TCCTCTACGC GTGGCTGCAC
CTGAGCGGCT ACGACATCCC GCTGGACGAG GTGAAGAAGT TCCGCGCGTT GCACAGCATC
ACGCCGGGGC ACCCGGAATT CCGCGAGACG CCCGGCGTCG AGGCGACGAC CGGCCCGCTG
GGGCAGGGGG TGGGCAACGC GGTCGGCATG GCGGTCGCCG GCCAGATGGC GGCGGCGCGG
TTCAACACGC CCGAGCACAC GGTTTTCGAC TATCATGTCG TTTGCCTCGC GGGCGACGGC
TGCATGCAGG AAGGCGTGGC GATGGAGGCC GTGGCGTTCG CCGGGCACCA GAAGCTCGAC
AACCTGATCC TGATTTACGA CTCGAACGAC GTGACGCTCG ACGCGATGGC GGTGAAGACG
CAGAGCGAGA ACGCCGCCGC GCGCTTCAAG GCCATCGGCT GGGACGTGCA GACGATCGAC
GGCCACGACA TGGCGGTGTT CCTGAAGGCC TTCAACAAGG CCAAGAAGGC AACGAGTGGA
AAACCGCAGC TGATCATCGC GAAGACGCAG ATCGCGCGCG GCATCCCGGA AGTCGCCGGC
ACGGCCAAGG GCCATGGCGA GGGCGGGGCA AAGTTCGCCG ACAGCGCGCG CGCCGGACTT
GGCTTGCCGG CCGACCAGCA CTTCTTCGTG AGCGACGACG TCCGCGCCTA TTTCGCGGAT
CATCTGAAAC GACTGCTCCG CCACTACAAG AAGTGGGAAA AGACGTTTGA GGCGTGGCGC
ACCGCTAATC CGGACAAGGC CGCGCTGCTC GACTCCGCGA AGAACGCGCC GAACGCGAGC
GCACTGCTCG CGAAGATCCC GGCGTTCCCG GCCGACGCCA AGCTCGCCAC GCGCGCGGCG
GGACGCGACG TGCTGCAGCC CGTCGCCGCG GAACTGCCGC TGCTGATCGG CGGCAGCGCC
GACCTCTACG GCTCGACGTT GAACCTCATC GCGGCGGACA AGGACTTTGA CCCGAGCAAT
CGCGGCGGCC GGAATATTCG CTTCGGCATT CGCGAGCACG GCATGGCCGC GATCGCGAAC
GGCATCGCTT ACGACGGGCT CTTCCGTCCG AGCGTGGCGA CGTTCCTCGT GTTTGCCGAC
TACTCGCGTC CGCCGATGCG GCTCGCGGCG CTATCGGATC TGCCCGTCGT CTACATCTAC
ACGCACGACT CGATCGGCGT CGGCGAAGAC GGCCCGACGC ACCAGCCGGT GGAGACGGTC
TCAGCGCTGC GCGTGATTCC GAACATGGAT GTGATCCGTC CGGCGGATCC GGAGGAAACC
GCCGGCGCGT TTGCTGCGGC GCTCGAACGG ACGGATGGGC CGACGCTGCT GGCGCTCACG
CGTCAGGCGC TGCCGATGCT GAACGACATT CCGGTGCAGA CGCGCCGCGA AGGCGTGCTC
AAGGGCGGCT ACGTGGCGAA GCAGGAAACG GCGGCGCTCA CCCACATCCT CATCGCGACG
GGCAGCGAAC TGCAGATCGC GCTCGCCGCG GCCAAGACGC TCGGTGCCGG CGTGCGCGTC
GTGTCGCTGC CGTCGTTCCA GCGATTTGAC CAGCAGTCGC CGGAGTATCG CGAGAGCGTG
CTGCCCGCCA GCTGCCGGAA GCGTGTCGCG GTCGAGGCGG GTGTGCCGGA CCTCTGGTAT
AAATACGTCG GCCTCGAGGG TAAGGTGGTG GGCATCGCCC GCTTTGGCCT GAGCGCTCCT
GGGCCGGTCG TGTTCAAGGA ACTCGGCATC ACCGCCGAAG CCGTCGTCGC TGCCGCTCAG
TCGCTGTAA
 
Protein sequence
MPLQTPLLAK AANQARGLAI DAVHACSSGH LGLPLGAAEI GAVLYGHALV HNPEHPRWLN 
RDRFVLSAGH GSMFLYAWLH LSGYDIPLDE VKKFRALHSI TPGHPEFRET PGVEATTGPL
GQGVGNAVGM AVAGQMAAAR FNTPEHTVFD YHVVCLAGDG CMQEGVAMEA VAFAGHQKLD
NLILIYDSND VTLDAMAVKT QSENAAARFK AIGWDVQTID GHDMAVFLKA FNKAKKATSG
KPQLIIAKTQ IARGIPEVAG TAKGHGEGGA KFADSARAGL GLPADQHFFV SDDVRAYFAD
HLKRLLRHYK KWEKTFEAWR TANPDKAALL DSAKNAPNAS ALLAKIPAFP ADAKLATRAA
GRDVLQPVAA ELPLLIGGSA DLYGSTLNLI AADKDFDPSN RGGRNIRFGI REHGMAAIAN
GIAYDGLFRP SVATFLVFAD YSRPPMRLAA LSDLPVVYIY THDSIGVGED GPTHQPVETV
SALRVIPNMD VIRPADPEET AGAFAAALER TDGPTLLALT RQALPMLNDI PVQTRREGVL
KGGYVAKQET AALTHILIAT GSELQIALAA AKTLGAGVRV VSLPSFQRFD QQSPEYRESV
LPASCRKRVA VEAGVPDLWY KYVGLEGKVV GIARFGLSAP GPVVFKELGI TAEAVVAAAQ
SL