Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3725 |
Symbol | thrH |
ID | 6205304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4847996 |
End bp | 4848571 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641693391 |
Product | phosphoserine phosphatase |
Protein accession | YP_001820600 |
Protein GI | 182415534 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR02137] phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.158906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGGCG TTCTCACGCC CGAGATTTGG ATCGCTGTCG CCGAACGCAC CGGCATCCCC GAACTGCGTC GCACGACCCG TGACGAACCC GACTACGACA AACTCATGCT CTACCGGATC GACATACTCG ACCGGCACGG AATTACCCTC TCCAAGATTC AAGAGGTCAT CGGCACCCTG CAACCACTCA CCGGTGCCGT CGACTTCCTC AATGCGCTTC GCGGCCGCGT GCAATTCCTC ATCCTTTCCG ACACGTTTGA GCAATTCGCC GTGCCGCTGC TGCGCCAGCT TGGCTGGCCA ACCTTGTTCT GCCACCGGCT CGTGGTGCAG AACGACCGGA TCACCGGCTA CCAGCTGCGC ATGCCGGACC AGAAGAAACA GGCCGTGCAG GCGCTGCAGT CGCTCCGCTA CAATGTCATC GCGGCCGGCG ATTCGTTCAA CGACACGTCC ATGCTCTGCC AGGCCGACAG CGGGATCCTC TTCCACGCAC CGGAGAACGT GATCAAGCAG TTTCCGCAGC TCCCGGCCGT CCACGACTAC GCCGACCTAC TGAAGCTGAT CGAGTCCCGC CTGTAG
|
Protein sequence | MEGVLTPEIW IAVAERTGIP ELRRTTRDEP DYDKLMLYRI DILDRHGITL SKIQEVIGTL QPLTGAVDFL NALRGRVQFL ILSDTFEQFA VPLLRQLGWP TLFCHRLVVQ NDRITGYQLR MPDQKKQAVQ ALQSLRYNVI AAGDSFNDTS MLCQADSGIL FHAPENVIKQ FPQLPAVHDY ADLLKLIESR L
|
| |