| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3665 |
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| Symbol | |
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| ID | 6208666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4758855 |
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| End bp | 4760882 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693333 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_001820542 |
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| Protein GI | 182415476 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.115982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.315429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACGA TTGATTTCCG CGCCGCCGAC GCCACCGCGC GCCGGCGGCT GCTGCACGAC
CAGTGGCTCG TTACTAACGG CCTCGGCGGA TTCGCTTCCG GTACCCTGTC CGGCGCGGTC
ACGTGGCGCT ATCACGGGCT GCTCGTGTCG GCATTGCCCG CGCCGCTCGG CCGCACGGTG
ATGCTCAACC ACCTCGCCGA TGCGATGGAA TTTCCCGACG GCCGGTTGCT GCGGCTGGGC
GACCTCGGCG CCGTGGCGGA GGAGGAGGAT CTCGCGCGCA ATCCGCTGGT GGAGTTTCAG
CTCGATCATC ACGTGCCGGT CTGGCGCTAC GAGGCCGGCG AGGTGGTGGT GGAGAAACGG
CTCCTGATGG CGAATCTCCA GAACGCGGTT CACGTCAGCT ACACGCTGCG CGCCGGCCCA
GCTGACCTGC GGCTGCGCTT GCGTCCGGCG GTGCACTTCC GTCCGTTCGA AGCGGCGGTG
AGCACGCCAC TCGCGACCGG CTACGAGCTG CGGCTGCAAG GCTCGCGCTA CGAAATCGAC
TCGCACGAGC AGTATCCGCC CTTGCGGCTG CTGCTGCGCG CCGCCGATGT GCGCTTCGCC
TACGACGGCG GCGCGACCTT CGACGTGCAC TACGGACACG ACGCCGCCCG CGGCTACGAA
TCGCGCGGCT CGCTCTGGTC GCCGGGCTTT TTCTCCGTCG CGCTGCCGCT CAACACGCCC
GTGACGCTGG TCGCCTCGAC CGACGAATGG CGCACGATCG AAGCCCTCGA TCCCGAAACG
GCCCATGCCA CCGAGCTCGA GCGGCGCCAA CGATTGCTGC GCATTGCCCA TCCGGCGGCC
CGCGAGGCGT TCGGCGGCGC ACTGGTACTC GCCGCGGATC AGTTCGTGAT TTTCCCCATC
GGCCGGATCA AGGACGCCGC CCGCGCGCGG GCGATGGGCG ACGAGTTGCG CAGCGTGATC
GCCGGTTATC ATTGGTTCAC CGACTGGGGG CGCGACACGA TGATCTCGCT CGAGGGGCTC
ACCCTCGCGA CGGGACGCAC CCAGGAGGCG GCCTGGATCC TCCGCTCGTT CGCGAACTAC
GTGCGCGACG GCTTGATTCC GAACCTGTTT CCCGAGGGTC AGAACGAAGG CCTCTACCAC
ACCGCGGACG CAACGCTGTG GTTCTTCCAC GCGCTCGATC GCTACGTCGC CGTCACGCAG
GACCGCGAGA CGCTGCGCGC GCTGCTGCCG GTGCTGCGCG ACATCGTCGA CCACCACCTG
CGGGGCACGC GTTTCGGCAT TCACGTCGAT CCGCGCGACG GCCTGCTCGC GCAGGGCGAA
GCCGGCTACC AGCTCACGTG GATGGACGCC AAGGTCGGCG ACTGGGTCGT GACGCCGCGG
CGCGGCAAGG CGGTCGAGAT CAATGCGCTC TGGTTCAACG CGCTGCAGTT GCTCGCGGGC
TGGTTGCGCG AGGAAGGTTA CGGCGAGCCG GCCGCGGTGC TCGGCGAACA TGCGACGCGC
GCCGCCACCT CGTTCAACCA ACGTTTCTGG AATGCCGCGA ACCACTGTCT CTTTGATGTC
GTCGACGGCG AGCAGGGCGA CGATCCGGCG ATCCGTCCGA ACCAGCTCTT CGCGATTTCG
CTGCCGCATC CCATCCTCGC CCAGGAACAC TGGGCCGCCG TGGTCGACGT CGCCGAGCGT
GAGTTGCTGA CGCCGGTCGG GTTGCGGTCG CTCAGTCCGC GACACAAGGA TTACAAACCG
AGTTACACGG GCGATCTTCG CGCGCGCGAT GCCGCTTACC ACCAGGGCAC TGTCTGGGCG
TGGTTGATCG GGCCGTTCAT CGACGCGTGG TTGAAGGTAC ATCCGCAGAA ACGCGCCGAC
GCGCGCCGGC TGCTCGACGG CTTCTCCGCG CATCTCGATC ACGGCTGCGT CGGCTCGATC
AGCGAGGTGT TCGACGCGGA GCCGCCGTTC ACCGATCGCG GTTGCATCGC GCAAGCGTGG
AGCGTGGCCG AGGTGCTGCG CTGTCTGGTG CTCACCAGCC AGGAATAG
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| Protein sequence | MRTIDFRAAD ATARRRLLHD QWLVTNGLGG FASGTLSGAV TWRYHGLLVS ALPAPLGRTV
MLNHLADAME FPDGRLLRLG DLGAVAEEED LARNPLVEFQ LDHHVPVWRY EAGEVVVEKR
LLMANLQNAV HVSYTLRAGP ADLRLRLRPA VHFRPFEAAV STPLATGYEL RLQGSRYEID
SHEQYPPLRL LLRAADVRFA YDGGATFDVH YGHDAARGYE SRGSLWSPGF FSVALPLNTP
VTLVASTDEW RTIEALDPET AHATELERRQ RLLRIAHPAA REAFGGALVL AADQFVIFPI
GRIKDAARAR AMGDELRSVI AGYHWFTDWG RDTMISLEGL TLATGRTQEA AWILRSFANY
VRDGLIPNLF PEGQNEGLYH TADATLWFFH ALDRYVAVTQ DRETLRALLP VLRDIVDHHL
RGTRFGIHVD PRDGLLAQGE AGYQLTWMDA KVGDWVVTPR RGKAVEINAL WFNALQLLAG
WLREEGYGEP AAVLGEHATR AATSFNQRFW NAANHCLFDV VDGEQGDDPA IRPNQLFAIS
LPHPILAQEH WAAVVDVAER ELLTPVGLRS LSPRHKDYKP SYTGDLRARD AAYHQGTVWA
WLIGPFIDAW LKVHPQKRAD ARRLLDGFSA HLDHGCVGSI SEVFDAEPPF TDRGCIAQAW
SVAEVLRCLV LTSQE
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