Gene Oter_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3605 
Symbol 
ID6204983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand+ 
Start bp4688224 
End bp4688880 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID641693273 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001820482 
Protein GI182415416 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.406729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGC CGATCCTCGC CCCCTCCCTG CTTGCCGGCG ATCACGCGCA GCTCGCCACC 
AGCGCGCGGA TCGTCGAGGA ACTCGGACTG CCTTGGCTGC ACCTCGACAT CATGGACGGC 
CATTTCGTGC CGAATCTGTC GTTCGGTCCG GCCACCCTCA CGGCGCTTCG CCGGCACGGG 
ATCAAGGCGT ATTTCGACAC GCACCTGATG CTCTCGCAGC CGGCGCGCTA CATCGAGCCA 
TTCGCCAAAG CCGGCGCGAA CCAGATCAGC ATTCACATCG AACCCACTTA CGACCACGCC 
GACACGTTGG ACCGCATCCA TGCGCTCGGC TGCCAGGCGG GCATCGTGCT CAATCCTGAC 
ACTCCCGCCA GCGCGGTCGA GCCACTGCTC GCGCGCGTGG ACCTGGTGCT GGTAATGACC 
GTGCAGCCCG GGTTCGGCGG GCAGTCGTTT CGCGCCGCGA TGCTGCCGAA GATCCGGCAA 
CTCGACCAGT GGCGGAGCGA GCGTGCGCTC ACGTTTCGGC TCGAAGTCGA CGGTGGCATC 
GATCTCGAAA CGGCCCGGCA GTGTCGCGCC GCCGGCGCCG ACACGTTTGT CGCCGGCACC 
TCCTTCTTCG GCGCACCCGA CAAGCCCGCC TTCGCCGCCG CGTTCGCGCA GCTGTAG
 
Protein sequence
MHPPILAPSL LAGDHAQLAT SARIVEELGL PWLHLDIMDG HFVPNLSFGP ATLTALRRHG 
IKAYFDTHLM LSQPARYIEP FAKAGANQIS IHIEPTYDHA DTLDRIHALG CQAGIVLNPD 
TPASAVEPLL ARVDLVLVMT VQPGFGGQSF RAAMLPKIRQ LDQWRSERAL TFRLEVDGGI 
DLETARQCRA AGADTFVAGT SFFGAPDKPA FAAAFAQL