| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3602 |
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| Symbol | |
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| ID | 6205150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4686174 |
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| End bp | 4687211 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693270 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001820479 |
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| Protein GI | 182415413 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.310162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCA CCTTCGCTCG CGCATTCGGC GCTCTTTGCC TGCTCTTTTC GTTGTCTTGC
CTGCTCGCGA CTGCAGCGCG GGCCGATCTC GTGTGGAACC CCAACACGGG CTGGCGGATC
GAGGGCGGCG TGCTGTCCGA GATCACCGGC AGCGACGCCC ACAACGCGCT GAACCTGATG
AATCGCGCGC GCGAGCTCGA GGAGGACGGC AGCCGTGGCG CCGCCATCCG GCGCTATAAG
AAAGTGGCGA AGCGATACCC GGCGTCGATC TACGCCTCCG AAGCGCTCTA CCGCTCGGGC
AAGCTCTACC TGGCCCGCAG ACAGTATTTC AGATCGTTCG AGGCCTTCAT GGAGGTGACC
ACGCGTTACC CAAATACGAA GCACTTCAAC GACGTCATCG GCGAGGAATA CCGGATCGCC
AGCGCGCTGC TCGACGGCGC TCGCAACCGC TGGTGGGGCT GGTTTCCCGG CTTCACCAAC
CGCAGCCGCG CGATCGATTA CTTTGAGATC ATTGTCCAGA CGGCGCCCTA CAGCGATTAC
GCGCCGCTCG CGCTGATGAA CAAGGCCCGC GGTCACCTGC GCGCCCGCGA AACCGAGGAG
GCGATCGACG CGCTGGACCG GATGATCAAC CAGTATCCGC AAAGCCTGCT CGCACCCGAC
GCCTACCTGA AGCTCGCGCA GACCCACGCG CTGCTCGTCG AGGGACCCAA CTACGACCAG
GGCTCGACCA AGGAAGCGAT CACCTATTAC GAGGATTTCC TGATTCTCTT CCCCAACGAT
CCCAACGTGC CGACAGCAGC CAAGGGTCTC GACGAAATGA AGCAGGTGCT GGCCGAGAGC
AAAATCCGGA TCGGCGATTT CTATTTCTAC AAGCGCGACA ATTACACCGC CGCGCGCGTG
TTCTACAACG AGGCGATCAC GTCGTATCCC GACTCGCCGG TGGCGCAGCG CGCCCGGACA
AAGCTCGCGG AAGTCGAGGC CAAGGCGTCG GTGAAGCCGG GCGAAGCGCC GCGCAAGAAG
CGGTTTTTCT TCTTCTGA
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| Protein sequence | MPTTFARAFG ALCLLFSLSC LLATAARADL VWNPNTGWRI EGGVLSEITG SDAHNALNLM
NRARELEEDG SRGAAIRRYK KVAKRYPASI YASEALYRSG KLYLARRQYF RSFEAFMEVT
TRYPNTKHFN DVIGEEYRIA SALLDGARNR WWGWFPGFTN RSRAIDYFEI IVQTAPYSDY
APLALMNKAR GHLRARETEE AIDALDRMIN QYPQSLLAPD AYLKLAQTHA LLVEGPNYDQ
GSTKEAITYY EDFLILFPND PNVPTAAKGL DEMKQVLAES KIRIGDFYFY KRDNYTAARV
FYNEAITSYP DSPVAQRART KLAEVEAKAS VKPGEAPRKK RFFFF
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