| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3576 |
|---|
| Symbol | |
|---|
| ID | 6206085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4656346 |
|---|
| End bp | 4657221 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641693244 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_001820453 |
|---|
| Protein GI | 182415387 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.220464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCG AACACCTTTT CTTCGAGGGC ATCGCCACGG CGCCGCGGCG CAAGAGTGGG
TGTCGAACGC GGGCGCTCGT CCGGCCGGGT GGGGACGAAC CAGCCGAGCA GGTCAGCGGT
TTCATCGCCG CCCTGCTGCA GCGAGCCAAT CTTTCGGCGG CGTCTTACCG GGGCCCGGCG
TTGCACCGGC GGACGGCGGC CTGCCTGCGG TTCCTTGGCG TCGCGAGCGC GGACGAGGGC
CTGCGGCGAA TCGAGTGCGA TCCCCGACTG ACGCAGTCGG CGTTGAGCGT GGCGTTGCTG
GGCGTGACGG AGTTTTTTCG CGACCAGGCG GTCTTCGAGC GACTCGGCTC GGCCGTGCTG
CCGGAGCTGC TCGCGCGCCG GGGCCGGATA CGCGTGTGGA GCGCGGCGTG CTCATCCGGG
CATGAGTTGT ATTCCGTCGC GATGCTGCTC GCCGAGTTGG GCCGCCTCGC CGACGCCGAG
TTGCTCGGCA CGGACTGCCG GGCGGACGCA ATCGAGCAGG CGCGTGCGGG AGCGTTCGAC
TGGGAAGCGG TCGCGTCGTT GGCGCCGTTC CGACGCGAGC GCTATTTCAC GCGTTACGGA
AATTCGGGTT TGATCAACGC CGATCTGCGG TGGGCGACCG AGTGGCGCCA GGCGGACTTG
CTGGCGGGGG TGGAGCGTGG CCCGTGGGAT CTGATTCTTT GGCGAAACAT GGCCATTTAT
CTCGAAGAGG CGCCAGCTGA GGAGGTTTGG GCGCGGCTGA CGCGGGAGCT GGCGCCGGGC
GGCTTGATCG TATGCGGCAA GGCCGATCAT CCCCCGGCTG GGTTGCCGCT TGAGCGGATT
GCCCGGTGCT TCTATCAACT GAGCGGATCG ATATGA
|
|---|
| Protein sequence | MQFEHLFFEG IATAPRRKSG CRTRALVRPG GDEPAEQVSG FIAALLQRAN LSAASYRGPA
LHRRTAACLR FLGVASADEG LRRIECDPRL TQSALSVALL GVTEFFRDQA VFERLGSAVL
PELLARRGRI RVWSAACSSG HELYSVAMLL AELGRLADAE LLGTDCRADA IEQARAGAFD
WEAVASLAPF RRERYFTRYG NSGLINADLR WATEWRQADL LAGVERGPWD LILWRNMAIY
LEEAPAEEVW ARLTRELAPG GLIVCGKADH PPAGLPLERI ARCFYQLSGS I
|
|---|
| |