| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3554 |
|---|
| Symbol | |
|---|
| ID | 6207153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4628196 |
|---|
| End bp | 4628996 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641693222 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_001820431 |
|---|
| Protein GI | 182415365 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA AGCTCATCGA GATCATGGCG CACAAGCGGC GCGAAATCGC CCCGCTGATT
CGTCCGGTCA CCGAGACCGA GCTCGCGCAG CTCGACGCCT CGCGGCCGAA GCCGCCTTCG
TTCGCCGACG CCCTGCGCCG GCCCGACGGT ACGCTGGCCG TGATCTCCGA GATCAAACGC
CGCTCGCCGT CCGCCGGCGA GATCAAGGCC GGTGCGTCCG CGGTCGAGCA GGCCCGCCGC
TACCGAGCCG CCGGCGCCGA CGCGCTCTCG ATTCTCACCG ACACGGAATT CTTCGGCGGC
ACGCTCGCCG ACTTGAGCGA CGTCACGACC GAGTTCCGGG ACCAACGTCC CGCGCCGCCA
TGTCTGCGCA AGGATTTCAT GGTGCATCCG GTGCAGGTCG CGCAGGCGCG CGAGGCCGGC
GCCTCCGCCA TCCTGATCAT TGTGCGCGCG CTGGATGACG CCGAGATTCA GGCCCTGTAC
AGCGCCGCCC AAGCGGCCGG ATTGGACGCG CTGTTCGAGG TTCACCACGA AACCGAGCTC
GAGCGCGCCC TGCATCATCG CGCGCGGATC ATTGGCGTGA ACAATCGCGA CCTCGCCGTC
TTCAAGACCG ACCTGGCGCT CAGCGAACGG CTGATCCCGC AATTCCCGCG CGACGTGATC
GCCGTGAGTG AAAGCGGCAT CTTCACGGGC GCCGACGCGC GGCGCGTGCA CGCCGTCGGC
GCGCACGCCG TGCTCGTCGG CGAAGCGCTC ATGAAAGCGC CCGATCCCGC CGCGCTGATC
GCCGAGTTCC GCGCGCGTTG A
|
|---|
| Protein sequence | MPDKLIEIMA HKRREIAPLI RPVTETELAQ LDASRPKPPS FADALRRPDG TLAVISEIKR
RSPSAGEIKA GASAVEQARR YRAAGADALS ILTDTEFFGG TLADLSDVTT EFRDQRPAPP
CLRKDFMVHP VQVAQAREAG ASAILIIVRA LDDAEIQALY SAAQAAGLDA LFEVHHETEL
ERALHHRARI IGVNNRDLAV FKTDLALSER LIPQFPRDVI AVSESGIFTG ADARRVHAVG
AHAVLVGEAL MKAPDPAALI AEFRAR
|
|---|
| |