Gene Oter_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3549 
Symbol 
ID6205738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4623025 
End bp4625271 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content68% 
IMG OID641693217 
Producthypothetical protein 
Protein accessionYP_001820426 
Protein GI182415360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTCTC ACGCGTTTCG CCCTCTCGCA TCGTTGTTTT GCTTCCTCGC GGCCCTTGCG 
ACCGTTTCCG CCGATCCGCT CTCGCATCGC GTGGAAATCG ACTTCTTCCG CGATGTGCCG
AGCCGCAACC TCAAGGGCCT CGCCGCGCGT TCGGATGGCC GGCTCGTTGC TGGCCCGGTG
TTGAGCGAGC TCGCCGGCGC CGCGCCCGCG GATCTGCTCT GGTCGCTTTC GCCGACGAAC
GATCCGGCGA AGTGGCTCGT CGGCACCGGC CCCGATGGCA AGATTTTCGA GATCACGATC
GACGCCGCGA AGGCCACGTT CTCCGCCCGC GAGATCGCCA AGCTCGACGA ACCCCACGTA
TTCGCCCTCG CCCGACTGCC CGATGGCGCC CTGCTCGCCG GCACCTCGCC CACCGGCGCG
CTTTGTCTCG TGCGCGAGGG CAAACCAGTC GCGCGCGTTG CGCTGCCGGT GGATTCGATT
TTCGATCTGC TGCTGGTCGA CAACTGGACC GCGCTCGTGG CCACCGGCAA CCCGGCGCGG
CTGTATCGCG TCGATCTCCG CAAGTTTGCC GCCGCCGGCG TCGCGGCCGA CAAGCTCGCC
GAGGCCAAGC TGCTCGCCGA GCGCGGTATC ACGCTCTTCG GCGAGATCCG CGACCGGAAC
ATTCGCCGGA TCGCCCAGCT CGCCGATGGC CGGATCGCGG TCGGCTCCTC GCCCAAGGGC
AACCTCTACG CGTTCGCGCG CGACGGCGGC GCACCGATCA TCCTGCAGGA AAACCGCGAA
GCTGAGGTCA CCGATCTGCT GCCGACGCCG GACGGTGGAC TCTACGCCGC GCTCACGTTC
TCCGGCGGCA ACAACGAGGC CCGCATCACG CCCCCGAAAA ACCCGCCGAA GGAGCCGAAC
GAGTCACCGA TCTTCACCCC GCTGGCGAAC GATCGCTTCG GCGGACGCGG CGCCGTGGTC
TGGCTGCCGG ACAATGGCTT TCCCGAGACG ATTGTGAGCC GCGGCAACAC CGCGTTCTAC
CGCATGGTCC GCCACGGCGA CGTGCTGCTG ATCACCGGCG GCGAACAGGG CGAGATCGTC
GGCTACGATC TGCCGCACCG GATGTCGCTC ACCTACGCGG GCAGCGTGTC GTCGCAGCTC
AACGCGCTCG CCCCGCTGGC CGGCGCGCCC GGGCGGTTTC TCGTAATGCG CAACAACGCG
CCCGGTTTCG CGCTCCTCGA CTTCTCGCAG GCTGCCCCAC GCGAAGCCGA GACGCGCCGG
ATCGACCTTG GTGCACCGTC ACTGCTCGGC GCACTCCGCT TCAACCGACT GCGTGGACTC
ACGGACGCGC AGGTCGGTGT CGCGTTGAAG ACCAGCAATG GCAGCGACGA GATCGAAGGC
TGGAGCCAAT GGACGCCCCT GACCGCGGCC GAGCAGGGCT GGAATGCCCC GGCGCTGCGC
GGCCGCTACG TAAAGCTGCG CGTTCAGGTC CCGGCCAACT CGGCCCCGGC GCTGGAGCTT
GATCGCGCCG CGCTCTACGC GCTGCCGCAG AACCGCCGGC CGCAGCTGCA GGATTTCCGC
GTGCTCTCCG CGAACTTTGG TCTCGTGCCG ATGCCCGAAC CGCCGCCCCA GACGCTGATC
TCCATCGGCC AGTTGTTGCA GACCGGCAAG CAGGACGACG ACAAGCGCAA GAATGCGTTC
CTCGGCAGCC AGATTGTCCC CACGCCCGGC GCGCAGGTCG TGCTCTGGAC GGTGACGGAT
CCGGACAATG ACGCCATCGT CTGCACCTTT TCGCTGCGCC GCGACGGCGA GGAGAAATGG
ATCGACGTGG TCCGCAACAC CCGCGAGCCC TACGCGCAGT TCGATACCGC CCACATGCCG
GATGGCGTCT ATTTCACGCG ACTGATCGCC ACCGAAACGG ATCCGCGTCC GGCCGACGCG
CGGCTCACCA CCACCTTCGA AACCGACGAT CTGGTGATCG ATCACACGCC GCCGCAAATC
CTCGCGGCCT CCGCGCAACG CAAAGGCGAG ATGTTCGAGA TCCGCGTCGA GGGTCGCGAC
GCGCTGTCGC TCCTTGACGG CATCGAGGCC GTTTTCAATC ACGGTGTGCG CGAGCAAACG
GAGCAGCCGG TCGACGGCAT TCTCGACAGC CGCAGCGAGA CGTTCGTGCT GGAGCTTCCG
TTGGCGCGCG TGGCGGGCGC GACCTCGGTC GAGGTCACGC TCTACGACGT TTTCGGCAAC
ACCACCGCAC AACGGCTGAG CTGGTAG
 
Protein sequence
MPSHAFRPLA SLFCFLAALA TVSADPLSHR VEIDFFRDVP SRNLKGLAAR SDGRLVAGPV 
LSELAGAAPA DLLWSLSPTN DPAKWLVGTG PDGKIFEITI DAAKATFSAR EIAKLDEPHV
FALARLPDGA LLAGTSPTGA LCLVREGKPV ARVALPVDSI FDLLLVDNWT ALVATGNPAR
LYRVDLRKFA AAGVAADKLA EAKLLAERGI TLFGEIRDRN IRRIAQLADG RIAVGSSPKG
NLYAFARDGG APIILQENRE AEVTDLLPTP DGGLYAALTF SGGNNEARIT PPKNPPKEPN
ESPIFTPLAN DRFGGRGAVV WLPDNGFPET IVSRGNTAFY RMVRHGDVLL ITGGEQGEIV
GYDLPHRMSL TYAGSVSSQL NALAPLAGAP GRFLVMRNNA PGFALLDFSQ AAPREAETRR
IDLGAPSLLG ALRFNRLRGL TDAQVGVALK TSNGSDEIEG WSQWTPLTAA EQGWNAPALR
GRYVKLRVQV PANSAPALEL DRAALYALPQ NRRPQLQDFR VLSANFGLVP MPEPPPQTLI
SIGQLLQTGK QDDDKRKNAF LGSQIVPTPG AQVVLWTVTD PDNDAIVCTF SLRRDGEEKW
IDVVRNTREP YAQFDTAHMP DGVYFTRLIA TETDPRPADA RLTTTFETDD LVIDHTPPQI
LAASAQRKGE MFEIRVEGRD ALSLLDGIEA VFNHGVREQT EQPVDGILDS RSETFVLELP
LARVAGATSV EVTLYDVFGN TTAQRLSW