| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3517 |
|---|
| Symbol | |
|---|
| ID | 6208530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4579103 |
|---|
| End bp | 4580401 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641693184 |
|---|
| Product | peptidase S41 |
|---|
| Protein accession | YP_001820394 |
|---|
| Protein GI | 182415328 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0636352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGA CTGCCACGAT CCTCGGGTTA CTCGGCATGA GTTGCGCGCT CTGCGCCGCG
GACATAGCGA ACAGGCTGTC CCCGCGGGAC CGTAGTCTCG GTTTCCGAAT GCTTGAACAG
GTCAGGCGTG ACATCGAAGA GAACCATTTT GATCCAGCTC TGAAAGGCGT GAACCTTAGC
GAGCGCTTCA ACGCAGCCCG TGGCGAGATC GAGGCCGCGA AGGACAACGG TGACGTTTTC
CGAGCCATCG CCTCGGCAGT GAGATCACTG AAAGATTCCC GGACACAGTT TGTTCCGCCG
GGCCGCGCTG CGACGTACAA CTATGGCTGG GACGCCACGC CGTGCGGGCG CGAATGTATT
ATCAACGATG TCGATCCAGC AGGTCCCGCC GCCGGCCTTC TGGCCCCGGG CGATCGGCTC
CTGGCCATCA ACGGCGCAGC CATTGACCGA GCGACATGGC CGGCTTGGAC TTACTATCTG
CAGGCGATCG AACCACACGC GAAGCTGCGT CTCGTCGTTG CTGCGCCGGA GCAACCTCCC
CGCGAAGTGG AGGTAGTGAC GCTCGTCACC CCGCGTGCAG CCATCGTCGA CCTTTCGCGC
GTGGTTCAGC AAATTCTGGA TGAGCGCGAC GAACTCGAGC GTGAGACCCG TAGCACCTTC
AAGGTCTACG ATAACGTGTT GGTTTGGCGA CTGAAGACCT TCACGTACGA CGAAAACGAT
ATTCGTTCGG GATTGAGGCG AGCCCGTGGG CACCAATCAT TGATTCTCGA TCTGCGCGGC
AACGGTGGTG GCAACGAGCC AACGATGGAG CGGTTGATTG GCGGCTTCTT CGACCGCGAC
GTCGGAATCG GTACTTTGAA GAAGCGCGCT GGCAGGCAGC CACTAACCGC CAAGTCTTCT
GGCCGCGACG TTTGGGCAGG CCGCCTCTTG GTCCTGGTGG ACGGTGAGAC AGGCGGTGCT
GCGGAAATAT TTGCCGCCAC CATCCAACGC GAGGGCCGTG GACTGCTCGT GGGCGACCAT
ACCGCTGGAG TAGCGCAACA AGGGAATTAC TACTCACACT CCATCGGAGC CAATCGGCTC
ACATTGTTTG GCGTGTTCGT CGCAACCGCT GAATTTGAAC TGGCTGACGG GCGGACCATT
GAAGGCAGCG GCTTGACGCC GGATTTCTTG ATCATCCGAA AGCCTGCTGA TGTCGCCGCT
CAGAACGATC CTGTGCTGGC GATGGCGCTA AAACAGTTCG GTGTCACGCG ATCGGCTGCT
GGGCTCGGCC GTGACTATCT CGGCGTGATT GAGCAGTAG
|
|---|
| Protein sequence | MRATATILGL LGMSCALCAA DIANRLSPRD RSLGFRMLEQ VRRDIEENHF DPALKGVNLS
ERFNAARGEI EAAKDNGDVF RAIASAVRSL KDSRTQFVPP GRAATYNYGW DATPCGRECI
INDVDPAGPA AGLLAPGDRL LAINGAAIDR ATWPAWTYYL QAIEPHAKLR LVVAAPEQPP
REVEVVTLVT PRAAIVDLSR VVQQILDERD ELERETRSTF KVYDNVLVWR LKTFTYDEND
IRSGLRRARG HQSLILDLRG NGGGNEPTME RLIGGFFDRD VGIGTLKKRA GRQPLTAKSS
GRDVWAGRLL VLVDGETGGA AEIFAATIQR EGRGLLVGDH TAGVAQQGNY YSHSIGANRL
TLFGVFVATA EFELADGRTI EGSGLTPDFL IIRKPADVAA QNDPVLAMAL KQFGVTRSAA
GLGRDYLGVI EQ
|
|---|
| |