Gene Oter_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3474 
Symbol 
ID6207615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4518426 
End bp4519088 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID641693140 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001820351 
Protein GI182415285 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.526901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG GTATTCGATT CAAAGTCTGC GGGCTCACGT CGCTGGCGGA CGCGATGGCC 
GCCGACAACT GCGGCGCGGA TTTCCTGGGC TTCATTCTCT ACCCGAAGTC GCCGCGATGC
GTCGCGCTCG TGCAGGCCCA GGCGATCATG TCCAAGTTGC CGGACCGCCG GAAAGTCGCC
GTGTGCGTCG AGCCGACGAC CGACGAACTC GCGCGCATGG AACAGGGGGG ATTCGACTGC
TTCCAGATTC ATTTTCGACC GGAGACTCAG CTTGCGGTGA TTCGCGGTTG GTCGGAGCGC
GTGGGCGCGG ACCGACTCTG GCTCGCGCCG AAGTTGCCGC CGGGCGGCCA CGTGAACGCG
GACTGGCTGC CGCTGGCCGA GACGTTCCTG CTCGACGCTT TTCACCCGAA TGCGTTCGGG
GGCACGGGGC AGACCGGCGA CTGGTCGAGC TTCGCGCGCC ACCGCGAAGC ACACCCGGGC
AAGACGTGGG TTCTCGCCGG CGGACTGGCG CCCGAGAACA TCGCCGAGGC ATTGCGCACC
ACCGGCGCCG GTTTCGTTGA TGTGAACAGC GGCGTCGAGG CGGTCCCGGG AATCAAGGAC
CACGCGAAGC TGAAACGGTT CGTGGTGCGG CTGCACGAAG CGCGCACCGC GTCACGCAAG
TGA
 
Protein sequence
MIDGIRFKVC GLTSLADAMA ADNCGADFLG FILYPKSPRC VALVQAQAIM SKLPDRRKVA 
VCVEPTTDEL ARMEQGGFDC FQIHFRPETQ LAVIRGWSER VGADRLWLAP KLPPGGHVNA
DWLPLAETFL LDAFHPNAFG GTGQTGDWSS FARHREAHPG KTWVLAGGLA PENIAEALRT
TGAGFVDVNS GVEAVPGIKD HAKLKRFVVR LHEARTASRK