| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3466 |
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| Symbol | |
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| ID | 6204456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4508623 |
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| End bp | 4510560 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641693132 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001820343 |
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| Protein GI | 182415277 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.348577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATCCA AATCCTCCTC CGCCTGGTCG GCGGCCAAAT CCGAAGAACT CTATGGGTTC
AAGCGCTGGG GCGCCGGCCA CATTTCCGTC GATGACGAGG GCTTCGTGAA TTTCCAGCCA
CGCGCCGACG AGCGCGGCAT CCGCGTGTTC GACGTCGTCA ACGAGGCGCT CGGCATGGGC
TTGAAGGCGC CGATGGTGAT TCGGTTCCAG GACCTGCTCC GCCACCGGGT GATCCAGCTG
AACGAGATGT TCCAGAAGGC CATCAAGGAG GAGGGCTACA AGGGCAGCTA CCGCGGTGTT
TTTCCGATCA AGGTCAACCA GCTGCGCGAG GTGGTCGACG AGATCGTCGC CGCCGGCAAG
GACTACGCCT TCGGGCTCGA AGCCGGTTCG AAGCCGGAGC TGATGATCGC GCTCGCGATG
CACGAAGGCT CGCAACGGCT GATCATCTGC AACGGCTACA AGGACCACGA TTACATCCGG
CTCGCGCTGC TCGGCCGCAA GCTCGGCAAG AAGATCATCA TCGTCGTGGA GCAGCTCGCC
GAGCTCGACG ACATCATCCG GCTCGCCGCC GAGACGGGGG TGAAGCCGAT GATCGGGTTC
CGCGCGAAAC TGCAGACGCG CGGCGAAGGC AAGTGGGCGC TCTCCACCGG CGACAACGCG
AAGTTCGGGC TGAACACCGC GGAAATCCTG TTCGCGATCG AAAAACTGCG CGCGGCGAAG
CTCACGCAGT CGCTGCGGCT GATCCATTTC CACATCGGGT CGCAGGTGCC GAACATCATC
ACGATCAAGA ACGCGGTGAT CGAGGCCACG CGGTTCTACT GCCAGCTCGC GAAGATGGGT
TTCCCGATGG GCTACCTCGA CGTGGGCGGC GGGCTCGGCA TCGATTACGA CGGCTCGCGC
ACCAACTTCG AGAGCTCGAT GAACTACTCG ATGGAGGAAT ACGCGCGCGA CGTCGTGTTC
AACGTCCGCG AGATCTGCAC CGCCTCCGAC GTCGAGGTGC CCGACATCGT CAGCGAGTCC
GGCCGCGCGA TCGTGGCGCC CCACTCGCTG CTGGTCGTCG AGGTGTTCGA ACGGATCAAC
AAGCGCGAAT CGCTGGGGCA GCAGCACCAG CCGAAGGTGA AGCACAAGGT GGTGAGCGAT
CTCGAGGTGA TGCTGAAGAA CAAGGTCCGG CTCGGCCGGC TCGAGCGGTT CCACGACGCG
ATCCAGAAGA AGGAGGAGGC GTTTTCACTG TTCAACCTCG GTTATCTCGA TCTGGAAAAC
CGCGCCGCGG CCGAGTCGAT CTTCTGGCAG ATCTGCGAGC AGATCGCGAA GGAAGGCCGC
GACTCCGGCT ACCAGCCGGA GGAACTGCAC GAGTTGGACA AGCTTCTCGC CGACCAATAC
GTTTGCAATT TCTCCGTGTT CCAGTCGCTG CTCGATCACT GGGCGTTGAA GCAGCTGTTC
CCGATCGCGC CGATCCACCG GCTGAACGAG AAGCCCACGG TCAACGCGAT CCTCGTGGAC
ATCACCTGCG ACTCGGACGG CAAGATCTCG TCGTTCATCG ATCTGCAGGA CGTGAAGGAC
TACATCACGC TGCATCCGCT GAACAGCAAA CCGTACTACC TCGGCATTTT CCTGACCGGC
GCGTATCAGG ATATCATGGG CGACCTGCAC AACCTGTTCG GACGCGTGAA CGAGGTGCAC
GTTTTCCTCG AGGACGACGA ACCGAACGGC TTCTACATCG AGGAGGCGCT CAGCGGCAGC
CGGATCGCGG ACGTGATCGA GGGCGTGCAG TACCAGCAGG AAGACCTGTG CCGGAAGATG
AAGGCCCAGA TCGATGCCGC CACGCGCAAG GACATGGTGA AGCCGCGCGA AGGCGTGCGG
CTGCTCGAGC TCTACGAGAG CCAGATGCTC AACAAAACCT ACCTCAGCAT CGACCCGAAG
CGCGGGAAGA AGCGGTGA
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| Protein sequence | MKSKSSSAWS AAKSEELYGF KRWGAGHISV DDEGFVNFQP RADERGIRVF DVVNEALGMG
LKAPMVIRFQ DLLRHRVIQL NEMFQKAIKE EGYKGSYRGV FPIKVNQLRE VVDEIVAAGK
DYAFGLEAGS KPELMIALAM HEGSQRLIIC NGYKDHDYIR LALLGRKLGK KIIIVVEQLA
ELDDIIRLAA ETGVKPMIGF RAKLQTRGEG KWALSTGDNA KFGLNTAEIL FAIEKLRAAK
LTQSLRLIHF HIGSQVPNII TIKNAVIEAT RFYCQLAKMG FPMGYLDVGG GLGIDYDGSR
TNFESSMNYS MEEYARDVVF NVREICTASD VEVPDIVSES GRAIVAPHSL LVVEVFERIN
KRESLGQQHQ PKVKHKVVSD LEVMLKNKVR LGRLERFHDA IQKKEEAFSL FNLGYLDLEN
RAAAESIFWQ ICEQIAKEGR DSGYQPEELH ELDKLLADQY VCNFSVFQSL LDHWALKQLF
PIAPIHRLNE KPTVNAILVD ITCDSDGKIS SFIDLQDVKD YITLHPLNSK PYYLGIFLTG
AYQDIMGDLH NLFGRVNEVH VFLEDDEPNG FYIEEALSGS RIADVIEGVQ YQQEDLCRKM
KAQIDAATRK DMVKPREGVR LLELYESQML NKTYLSIDPK RGKKR
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