| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3439 |
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| Symbol | |
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| ID | 6208247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4473924 |
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| End bp | 4476491 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693104 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_001820316 |
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| Protein GI | 182415250 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.535221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA TTCTGATCGT GGCCGAAAAA CCTGACGTGG GACGCACCCT CGCGGCGGCA
CTCCTCGGCC GGACGTTTTC GGGCATGGGA CCGCATCGCG GCACGCTGCC GACGGGCGAG
GAGTTGACGG TCGTCACCGC GCGCGGCCAC CTCTTCGAAC TCGCGCCGCC GGAGGCTTAC
GACCCGAAAT ACGCCGCGTG GATCGTGCAC GACCTGCCGA TCACGCCGAG CACACGCTGG
GATTTTCAGC AGGTGCCGCG GGAGGACGCG GCCAACTACA TCCGGATCCT GCGCGACGAG
ATCGCCGCGC ATCTCAACGA CGAGATCGTC AACGCCTGCG ACGCCGGCCG CGAGGGCGAG
GTCATTTTCC GCAAGGTGAT GCGCGGCTGC GGCGCGAAAA GGTCGGCCCG ATACACCCGG
ATGTGGGCGC AGGTGATGAC CGAGGAAGGA CTGCGCGAGG CGTTCGCGCA GCGCGCGCCG
TCGGCCAACT ACAACGGATT GGGCGAGGCG GGATTCAGTC GCGACGAGGC GGACTGGCTC
GTCGGGATGA ACGTGACGGT GCTGGCCACG AAGACGCTGC CGCGCGGCCG CGGCAATTGG
AAGGTGTGGT CGGTCGGCCG CGTGCAGACG CCCACGCTGG CGCTGGTCGA CACGCGCGAC
CGGTTGATCG CCGATTTCAA GCCGCAGCCG TTCTGGGAGG CGTTCGGCGG GTTCGGGGAC
GTCGAGGCCA AGGCCGACCT CGACGCCTAT GCCGAGTCGG CCGACCGGCC CAAGCTGCTC
GGGTCGCCTG AGGTGAACAC CGAGCGCTCG AAGAAGGTGT TCTGGAGCCA GGAGAAGGCG
AACGCGTTTG CCGCCGCCGC CAAGGCGCCG CCGACGTATA CGGTGGCGGA CAAGAAGGGC
ACGCGGACGG AGCGGCCGCC GCTGCCGTTC GACCTGCAGG AAGTCCAAAA GCTCTGCTCG
AAGCGACGGG GGCTCACCGG CACCGAGTCG CTGGCGGTGC TCCAGGATCT TTACGAGAAG
CGAAAGCTGC TCAGCTACCC GCGTACGGAC AGCCGTTACC TGCCGACGAA GTTGAAGGCG
CGGCTGCACG CGGATCTCGC GCGCGTGCTC GCCGCAGTGA AGGCGACGCA TCCGCAGCTG
CACCTCGCCA GCCAGGAATT GATGCCGGCG GAGGTCGCCG CGAAAGCGCG CGCGTTCGAC
GACGCCAAAG TGAGCGATCA CTACGGCATC GTGCCGACCG GCGCGACCGC CGGGATCGCC
GAGCTGGAAG GACACGAGCT GTTCGTTTTC CTCGCCGTGC TGCAGATGAC GCTGATGGCA
CTCGACGAGC CCGCGCGCTA CCAGACGGTC ACACGGCGTT ACACGCAGGA GGGCGGCGCC
GGCCCGTATG CGCCGGCGGT GTTCCGCACT ACGCGCGAGG AGATCGAGGT GCCGGGCTTC
ACGCGCTGGC GGAAGGAGAC GGAGAAAAAG TCGGCGCCGC TGCCGGCCGC ACAGTCCAGC
CAGGCGACGC TGGACGCCGT GACGCTGAAG GAGCTGCGGA CGAATCCGCC GGATCCCTAC
ACGGATGCGA CGCTGCTCGA CGCGATGAAG TATGCCGGGG AAACGGTCGA CCCGGAGCTG
GATCCGGAAC AGGCCGACGC GCTGATCGAG GTGATGAAGG ATCGCGGGAT CGGCACGCCG
GCGACGCGGG CGGGAATCAT CGACAAGCTC GTGGCACGGC AGTTTCTCGA GCGGCAGGGC
AAGGCGATCG TCACGACGGA GAATGGCCGG CAGCTGATTC GCGAACTGCG GGCTCGCGCG
CCGGATTTCC TGTCGGCGCA GCTGACCGCG GAGTGGGAGC TCGTGCTGAA ACAGATGGAG
CGCGGCGAGG CGAAGCTGAA CCGCGGGCAG TTTCTCGATG CGCTGCTGGC GCAGGTGGTG
ACGTTGAAGC AGGCGTTTTT GGCCAAGACG TCGCGCGACA TCGAGACGGC GGCGGTACCG
GTGACCGAGG GCACGCCGGT GGCTGACGCG GTGTGTCCGA AATCGCAGCA GCCGCTGCTG
GATCGCGGGC CGTTTTTCGA GGCGCCGGGA TTTCCCGGGC TGCGGCTCTG GAAACGGGCG
TTCGGGCGGA CGTTCTCCGC GGCGGAGTAT GTGGCGCTGC TGACGGCCGT GGCGGCGGGG
AAGCCGCATC ACGTGACCGG CATGAAGTCA GGGCAGGGGC GGGAGTTCGC AGCCGACCTC
GTGCTGAACG CGGACGGCAC GAAACTCGAA ATCCACCGGC CGGAACCGAA GAAGGTGAAA
GGCGTGAAGT GTCCGAAATC GGGGAAGCTG CTGCTGGATC ACGGTACGTT CTTCGAGGCG
AGTGGCTGGC CCGGCGTGCG GCTGTACAAG AACGCATTTG GGCGAGTGTT CGCCGCGGAG
GACTATCTGC CGATCCTCGA AGGCTGGAAA GCGGGGACGC CGATCGTGGT GACCGGGCTG
GTGTCGGCGA AGACCGGCAA CCCGTACAGC GCGAAGCTCG TCCTGGACGC GGCGACGAAG
AAGGTGCGGT TGGAGTTTGG AAAAGATGAG CCCAGAGCGG AGAGATGA
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| Protein sequence | MPKILIVAEK PDVGRTLAAA LLGRTFSGMG PHRGTLPTGE ELTVVTARGH LFELAPPEAY
DPKYAAWIVH DLPITPSTRW DFQQVPREDA ANYIRILRDE IAAHLNDEIV NACDAGREGE
VIFRKVMRGC GAKRSARYTR MWAQVMTEEG LREAFAQRAP SANYNGLGEA GFSRDEADWL
VGMNVTVLAT KTLPRGRGNW KVWSVGRVQT PTLALVDTRD RLIADFKPQP FWEAFGGFGD
VEAKADLDAY AESADRPKLL GSPEVNTERS KKVFWSQEKA NAFAAAAKAP PTYTVADKKG
TRTERPPLPF DLQEVQKLCS KRRGLTGTES LAVLQDLYEK RKLLSYPRTD SRYLPTKLKA
RLHADLARVL AAVKATHPQL HLASQELMPA EVAAKARAFD DAKVSDHYGI VPTGATAGIA
ELEGHELFVF LAVLQMTLMA LDEPARYQTV TRRYTQEGGA GPYAPAVFRT TREEIEVPGF
TRWRKETEKK SAPLPAAQSS QATLDAVTLK ELRTNPPDPY TDATLLDAMK YAGETVDPEL
DPEQADALIE VMKDRGIGTP ATRAGIIDKL VARQFLERQG KAIVTTENGR QLIRELRARA
PDFLSAQLTA EWELVLKQME RGEAKLNRGQ FLDALLAQVV TLKQAFLAKT SRDIETAAVP
VTEGTPVADA VCPKSQQPLL DRGPFFEAPG FPGLRLWKRA FGRTFSAAEY VALLTAVAAG
KPHHVTGMKS GQGREFAADL VLNADGTKLE IHRPEPKKVK GVKCPKSGKL LLDHGTFFEA
SGWPGVRLYK NAFGRVFAAE DYLPILEGWK AGTPIVVTGL VSAKTGNPYS AKLVLDAATK
KVRLEFGKDE PRAER
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