Gene Oter_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3374 
Symbol 
ID6204499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4420238 
End bp4421482 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content68% 
IMG OID641693039 
ProductLacI family transcription regulator 
Protein accessionYP_001820251 
Protein GI182415185 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACG CGCCCTCCTG CAAGCCCGTC GGGAACGTGC CGGACTCATC ACGGCCGCCC 
GCCACCACCG CCGACTCCGC CCCCGCGGAA TCCGCCACAG CGACGCCCCA CCCGCGCCGC
GTCACCCAAT TGGACGTCGC CCGCGCGGCG GGCGTCCACA ACACCACGGT CTCGCTCGCA
CTGCGCAATA GTCCCGCGAT TCCAGAACCG ACGCGCCGGC GGATTCAATC CATCGCCGAG
CAAATGGGCT ACAGTCCGGA TCCCGCCCTG CGCGCGCTCG TCGCCTACCG CAATGGACTC
GCCGCGAACC GCCGAACCGA GTCGATCGCG TACGTGACGG ACAGCGCTAC GCGCTGGGGC
TGGCGCGACC TGCCCGCCGA GGAACAGTAT TTCGCCGGAG CACAGCGGAA GGCGGCGGCG
TGCGGGTATC AGCTCGAACA TTTCTGGCTC GGCGAACCCG GCATGAGCGC GCAGCGGCTG
AGCAGCGTGC TGTTCTACCG CGGCATCACC GGACTGCTGC TCGCGTCCCA ACGGTGCACC
CGCGCAGACG CGCTCGACTT CGATTGGACG CGTTTGAGCG CGGTGAAGAT CGGCTGGCTG
CCGCACACGC CTGTTTTGCA TCGCGTCACC AACGACTGCA CGGGTGATCT GCGGCTCGCA
ATTCGCCAAG TGCTCGCGGC CGGCTATCGC CGCCCAGGCT TGGTGCTGCC GTCCGCGTGG
GACGAAGCGG ATGACCAGGC GTGGTCCGTC GCGTTCCTGA CCGAGCGAGC CCGGCTCGCC
GAATCCCAAC GCGTTCCCAT TTTGTTTCAG GAGCCCGGCA TCGCGAACTC CAGCGAGAGC
GCCCTGCCCG ACGGTTGCGC GATCGATGAC GTGTCCGTGA GCCGCTGGTT CGACGAATTC
CGGCCCGACG TCATCCTCGG GCCTGCGGCG TTGCTGCCCG TGTTGCAGGA ACGTCGGATT
CACCTCGGCA AGGGCGTGGG TTTTGTCGGC CTGTTCCAGC AGGAACCCGC TGCGGCCATC
GCCAGCGTTC GCCAAAGCAG CGCGCGCGTG GGCGAAGTTG CCGCGGAACT CTTGATCGGC
CAGCTGCAGC AAAACCTGCG TGGCCTGCCC GAGATTCCCA CCACGACCTT GGTGCAGGGT
GTCTGGTGTG ACGGTGCCTC GCTGCCGCGC CGGCGGATCT CGACCTGGCC CGAACGCGTG
CGGAGATTCG CCGAGGAGCA CCGCAAGACC GCCTCCGCAG CGTAG
 
Protein sequence
MRDAPSCKPV GNVPDSSRPP ATTADSAPAE SATATPHPRR VTQLDVARAA GVHNTTVSLA 
LRNSPAIPEP TRRRIQSIAE QMGYSPDPAL RALVAYRNGL AANRRTESIA YVTDSATRWG
WRDLPAEEQY FAGAQRKAAA CGYQLEHFWL GEPGMSAQRL SSVLFYRGIT GLLLASQRCT
RADALDFDWT RLSAVKIGWL PHTPVLHRVT NDCTGDLRLA IRQVLAAGYR RPGLVLPSAW
DEADDQAWSV AFLTERARLA ESQRVPILFQ EPGIANSSES ALPDGCAIDD VSVSRWFDEF
RPDVILGPAA LLPVLQERRI HLGKGVGFVG LFQQEPAAAI ASVRQSSARV GEVAAELLIG
QLQQNLRGLP EIPTTTLVQG VWCDGASLPR RRISTWPERV RRFAEEHRKT ASAA