| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3319 |
|---|
| Symbol | |
|---|
| ID | 6205411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4343624 |
|---|
| End bp | 4344385 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641692985 |
|---|
| Product | class II aldolase/adducin family protein |
|---|
| Protein accession | YP_001820198 |
|---|
| Protein GI | 182415132 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3347] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.930557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.478639 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCA CGCCCCCGTC CCTCGCTTCA CTCCTCTCGC TTTCGCACGA ACTCGGCCGC
CCTGATCGCA ACCTCGCCAT CCTCGGCGAA GGCAACACGT CCGCGCGACT CGACGCCTCC
ACCTTTCTGG TCAAGGCGAG TGGCAGCAAT CTCGCTCAAC TCGCCTCGCG CGAAGTGACG
GCCTGCCGTT TCGCGCCCTT GCTCGAGCTG CTCGACCGCC GTGCGGTGGC CGACGCCGCC
GTCGAGGAGG CGCTGCTCGC GGCACGACTT GATCACGGTG CACGCAAGCC GTCCGTCGAG
GCGATGTTTC ACGCGTGGCT GCTCACGCTG CCGGGCATCG CTTTCGTGGG CCACACCCAT
CCGGTCGCGG TCAACAGCAT CCTCGCCTCG CCGCAGGCCG CTCGCTTTGC GCAGCGCCGG
CTGTTTCCCG ACGAAATCGT CTGCTGTGGC GCCGAATCCG TGTTCGTACC CTACGTCGAT
CCGGGCCTGC GACTCGCGCA GGCGATCCGC ACCGAAGTCA CCGCGTTTCG TCGCCGCACC
AACGCGATGC CGCGCGTGAT CCTGCTGCAG AACCATGGCA TGATTGCCCT CGGCGCCACG
CCCGGCGCGG TGCTCGCCGC CACGCTGATG ACCGCGAAGG CGGCGGCAAT CACGCTGGGT
GCCGCCGCGC TCGGCGGCGC GCGTCACCTG ATGCCGCGCG ACGTGGCGCG GATCGCCGCG
CGCACCGACG AGCATTATCG CCAGAAGGTC CTTGGACTCT GA
|
|---|
| Protein sequence | MSRTPPSLAS LLSLSHELGR PDRNLAILGE GNTSARLDAS TFLVKASGSN LAQLASREVT
ACRFAPLLEL LDRRAVADAA VEEALLAARL DHGARKPSVE AMFHAWLLTL PGIAFVGHTH
PVAVNSILAS PQAARFAQRR LFPDEIVCCG AESVFVPYVD PGLRLAQAIR TEVTAFRRRT
NAMPRVILLQ NHGMIALGAT PGAVLAATLM TAKAAAITLG AAALGGARHL MPRDVARIAA
RTDEHYRQKV LGL
|
|---|
| |