| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3264 |
|---|
| Symbol | |
|---|
| ID | 6207657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4273510 |
|---|
| End bp | 4274202 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641692930 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820143 |
|---|
| Protein GI | 182415077 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.356679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0257915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGTC GGATTCGTTC AATGTTCGCG GCGGCCCTCG GGCTGGCGCT CACGTGCTCA
CTGGCGCACG CTCAGCTCTT ATTGAGCGGC TACACCACGG GCTCGTTCGT CGACCTGTCG
GAGCCCAACA CCACTGTCTC GAATGCGGGC GATGGTAGCT GGGCGACCTT CCACACGGGC
ATCGCGGCAA CCGGTTCAAC TCAGTCCAAG ATCGAGTTTT CGAATACCAC GTTCACCGAC
GTGGCATCCG GCGATCCGAT TCAGGTCGGC CTGTTCGAAA TCACGAACGG CATGACCCTG
ATCGGTTCGG GCGCACCTAC CGCCCAATTC AATCTCGGCC TCGAGCTAAC CTCGCCGGTG
ATGCAGTCGG TCGCGTTGAC GCAGATTACG TTCCACGTCG ACCACACGCC GAATCTGCCG
GGAGCGATTC CCGACACGTT CAGCGCTTCC TTCACGCAGC CGACGGCGAT GAAAATCGGC
GACTATCTCG TGCAGTTCCA CGTGAACTTC GACCCGGCCG AATTCCAGGT CGCGGAGAAC
ACGATGGTGC AGCGCGGTGA TATCACCGTG AGTTTCACGC CGGTACCGGA GCCCGCCACG
TATGCCGCGT GGGGCGCCGC GCTGCTGGTC GGATTGGTCG GCTACCGGCG CCTGCGCGCA
CGGTCGGCCG CCAGCCTGCC TGCGGCTGCC TGA
|
|---|
| Protein sequence | MHSRIRSMFA AALGLALTCS LAHAQLLLSG YTTGSFVDLS EPNTTVSNAG DGSWATFHTG
IAATGSTQSK IEFSNTTFTD VASGDPIQVG LFEITNGMTL IGSGAPTAQF NLGLELTSPV
MQSVALTQIT FHVDHTPNLP GAIPDTFSAS FTQPTAMKIG DYLVQFHVNF DPAEFQVAEN
TMVQRGDITV SFTPVPEPAT YAAWGAALLV GLVGYRRLRA RSAASLPAAA
|
|---|
| |