| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3227 |
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| Symbol | |
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| ID | 6204203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4215068 |
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| End bp | 4216000 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641692894 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001820107 |
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| Protein GI | 182415041 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0308005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0252838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGTT CCCTCCTCGT TGCCGCGTTC GCATTGCTCG CGTGCACCGT AAGCCAGGCC
AAGCTCACCG TCGGTTTCGC CCAAACAGGC TCCGAGAGCG TTTGGCGAGC TGCCAACTCG
GAGTCCATCA AGTCGGAAGC GGAAAAGCAG GGCATCGACC TGCGTTTCGT CGATGCGCAA
AGCAACGTGG ACAATCAGAT GAAGGCGCTC CGCAGTTTTA TCGCCGACCA GGTCGACGCG
ATCGTACTCG CCCCGCTGGT GGTCAGCGGC TGGGAAGCCG TGCTGCAGGA CGCCAAGGCC
GCCGGCATTC CCGTGATCAT CATGGACCGC AAGATCGTCG CGGACCCGTC ACTCTACGCC
ACGTTCATCG GCTCAGATTT TTTCAAGGAA GGCCAGATGG CGGCGGAATG GATCCTCGCC
CATGCCGATC AGAAAAGGAA AATCGTCGAG CTGCAGGGTG AGCCCGGTTC ATCGGCCGCC
AATGAGCGCC AGCGCGCGTT CGCCTCGACC ATGGCGACGC ACACGAGCGA CGGTTTCCGG
ATCGTCGCGC GCAAGGTGGC CAATTTCCGT CGCGATCAGG GTCGCCAGGC GATGGCCGAA
CTCCTGACGA CGCACGGTTC CGACATCGAG ATCGTCTTCG CCCACAACGA CGACATGGCC
CTCGGCGCAA TCGAGGCCAT CGAGGCAGTG GGCCGCAGCC CGGGACGAGA CATCATGGTC
GTCTCGATCG ACGCGATCAA AACGGCCGTC GAGGCGGTCG CCTCCGGCAA ACTGAACTGC
ACGGTGGAAT GCAATCCCCT CTTCGGCCCC AAGGTGATCG AAGCCGTCGT CCGACTCACG
AGTGGCGGCA CCGTCATGAA GGAGACGTTC AACAAAGATA TCGTCATCGA CGCGTCGAAC
GCCGCGCAAC TCCTGCCCAG CCGGCAGTAC TGA
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| Protein sequence | MKRSLLVAAF ALLACTVSQA KLTVGFAQTG SESVWRAANS ESIKSEAEKQ GIDLRFVDAQ
SNVDNQMKAL RSFIADQVDA IVLAPLVVSG WEAVLQDAKA AGIPVIIMDR KIVADPSLYA
TFIGSDFFKE GQMAAEWILA HADQKRKIVE LQGEPGSSAA NERQRAFAST MATHTSDGFR
IVARKVANFR RDQGRQAMAE LLTTHGSDIE IVFAHNDDMA LGAIEAIEAV GRSPGRDIMV
VSIDAIKTAV EAVASGKLNC TVECNPLFGP KVIEAVVRLT SGGTVMKETF NKDIVIDASN
AAQLLPSRQY
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