Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3202 |
Symbol | |
ID | 6204356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4169421 |
End bp | 4169810 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641692869 |
Product | RbsD or FucU transport |
Protein accession | YP_001820082 |
Protein GI | 182415016 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0874902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGCA CCGGTATCCT GAACCCCGCG GTTCTGTCGC TCCTCGCCCG CGTCCGACAT ACCAATACGG TGGTCGTCGC CGATCGCGGG TTTCCTTTGT GGCCGCAAAT TGAGACCGTG GACCTTTCGC TCGTCGATGA TGTGCCCACC GTGCGTCAGG TGCTCGATGC CATCTTGCCG CAATATGTGA TTGGGCGGAT CTTCGCCGAG GAAGAGTTTC GTCAGGTCAA TTCTCCTTCC GTAGTCGAAG CGCTCCGGGA TCACACCGGT GCGATCCCGC TGGTGTTCGA GCCTCATGTG GAATTCAAGC GCCGGGTCCC GCACGCCATC GGTCTGATTC GGACCGGGGA TTCCACTCCC TACGCGAACC TGATCCTCGA ATCGGCCTAG
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Protein sequence | MIRTGILNPA VLSLLARVRH TNTVVVADRG FPLWPQIETV DLSLVDDVPT VRQVLDAILP QYVIGRIFAE EEFRQVNSPS VVEALRDHTG AIPLVFEPHV EFKRRVPHAI GLIRTGDSTP YANLILESA
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