Gene Oter_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3202 
Symbol 
ID6204356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4169421 
End bp4169810 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content61% 
IMG OID641692869 
ProductRbsD or FucU transport 
Protein accessionYP_001820082 
Protein GI182415016 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1869] ABC-type ribose transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0874902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCA CCGGTATCCT GAACCCCGCG GTTCTGTCGC TCCTCGCCCG CGTCCGACAT 
ACCAATACGG TGGTCGTCGC CGATCGCGGG TTTCCTTTGT GGCCGCAAAT TGAGACCGTG
GACCTTTCGC TCGTCGATGA TGTGCCCACC GTGCGTCAGG TGCTCGATGC CATCTTGCCG
CAATATGTGA TTGGGCGGAT CTTCGCCGAG GAAGAGTTTC GTCAGGTCAA TTCTCCTTCC
GTAGTCGAAG CGCTCCGGGA TCACACCGGT GCGATCCCGC TGGTGTTCGA GCCTCATGTG
GAATTCAAGC GCCGGGTCCC GCACGCCATC GGTCTGATTC GGACCGGGGA TTCCACTCCC
TACGCGAACC TGATCCTCGA ATCGGCCTAG
 
Protein sequence
MIRTGILNPA VLSLLARVRH TNTVVVADRG FPLWPQIETV DLSLVDDVPT VRQVLDAILP 
QYVIGRIFAE EEFRQVNSPS VVEALRDHTG AIPLVFEPHV EFKRRVPHAI GLIRTGDSTP
YANLILESA