Gene Oter_3194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3194 
Symbol 
ID6206283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4151584 
End bp4152441 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID641692861 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_001820074 
Protein GI182415008 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0616674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAGT CGCTCTTCGC CAGCTCCGCG GCTGCGCGGG CGGTTTACGA CGAGGCGAAC 
CGCGTGCTCG GCTGGGACTT GGCCCGCGTC AGTTTCGAAG GCCCCGACGC CGATTTGACG
CAAACCCGCG TCTGCCAGCC GGCGCTGTTC GTGCACGGTC TGGCCTTGCT GGCGACGCTG
CGGGAACAGC AAAAGCTGCC GGAGGTGAAC TTCGCGCTGG GCCTGAGTCT CGGCGAGATC
ACCGCTTACA CGGCGGCCGG GGTGTTCGAT TTCGCCACCG GGCTGCGCGT GGTCGCGAAA
CGCGGCGAGT TGATGCAGCG GGCCTGCGAA CAGACCACCG GCGGGATGGC GGCGGTCGTC
GGCGAAGAGC GCGAAAAGGT TGCGGAGCTC TGCCGCGAGT TCGACGTCGA GGCGGCAAAT
TTCAACGCGC CGGGCCAAAT CATCATTTCC GGCGAGAAGA CGAAGGTCGA AGCCGCGGTT
GCCGCCGGCA AAGCGCGCGG CATGAAGCGC GTGCTCCCGC TGAATGTCGC CGGCGCGTAT
CACAGCCGGT TGATGGAGCC GGCGCGCGCG GAATTCGCCA AATTTCTCGA CACGGTGCCG
TTCTCGACAC CGGCGTTCAC CGTCTTCACC AATACGACCG GCCAGTCGAT TCGCGAGCCG
GCCGCGCTGA AGGCCGCGTT GGTCAAGCAA GTCGTCTCCT CCGTGCTCTG GGAGGACTGC
ATGCGCAGCG CCGTCGCCGC CGGTGCCACC GAGTTCTGGG AACTCGGGCC GGGCGCGGTG
CTCGCGGGCA TGGCCCGCCG CACCGACAAA TCCTGGGTCG TGAAAAGCTA CGCCGAGTTC
GGCGACCTGA ACGCCTGA
 
Protein sequence
MGQSLFASSA AARAVYDEAN RVLGWDLARV SFEGPDADLT QTRVCQPALF VHGLALLATL 
REQQKLPEVN FALGLSLGEI TAYTAAGVFD FATGLRVVAK RGELMQRACE QTTGGMAAVV
GEEREKVAEL CREFDVEAAN FNAPGQIIIS GEKTKVEAAV AAGKARGMKR VLPLNVAGAY
HSRLMEPARA EFAKFLDTVP FSTPAFTVFT NTTGQSIREP AALKAALVKQ VVSSVLWEDC
MRSAVAAGAT EFWELGPGAV LAGMARRTDK SWVVKSYAEF GDLNA