| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3096 |
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| Symbol | |
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| ID | 6207920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4032964 |
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| End bp | 4034067 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641692761 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_001819976 |
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| Protein GI | 182414910 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.156001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAG CTGGTATCGT CGGTCTGCCC AACGTGGGCA AATCCACCCT GTTCAACGCC
CTCACCCGCT CGCGCAAGGC GGAGGCGGCC AACTACCCCT TTTGCACCAT CGACCCGAAC
GTCGGCGTCG TCACCGTGCC CGACGATCGC CTGGAGCCGC TCTCGAAAAT CTCCAAAACG
AGTGTGACCG TCCCCGCGGC CATCGAGTTC GTCGACATCG CCGGACTCGT CGCCGGCGCC
AGCAAGGGCG AAGGGCTGGG CAACCAGTTC CTCGCGAACA TCCGCGAGGT CGACGCCGTG
GTGCAGGTCG TCCGCTGCTT CGAGGATCCC GACGTGGTGC ACACGATGGG CGGCATCGAT
CCCGTCCGCG ATATCGAGGT GATCACGACC GAGCTCGTGC TCGCCGACCT CGACGCGGTC
GCCAAGCGGA TCGAAAAAGC CCAGAAAAAG GCGCGCGGCG GCGACAAGGA GGGCATCGCC
GAGCTCGCAC TGCTCGAAAA ACTCCAGCCG CATCTCAATG CCGGCAAGAC CGCCAACTTG
CTCCCCGCCA CGCCCGAGGA GACCGCGTTG ATGAAGCTCT TCCAGCTCCT CACCGCCAAG
CCCGTCCTCT TCGCCTGCAA CGTCGCCGAG AGCGACCTTG CCACGGCCGA GCAAAATCCG
TTTGTCCGCA AGGTCGCCGA CTACGTGGCC CACCACCACG ACGCCGCCTA TGTGCCGATC
AGTGCGAAGA TCGAGGCCGA GCTGATCGAC CTGCCGCCGG ACGAAGCGAA GGCCTTCCTG
CGGGATCTCG GCGTCGAAGA CTCCGGCGTT TCGTCCTTGA TCCGCGCGAC CTACGATCTG
TTGGGTCTGC AGACTTACTT CACCGCCGGT GAAAAGGAAG TCCGCGCGTG GACGATCAAG
AAAGGCTGGA AGGCGCCGCA GGCCGCCGGC GTGATCCACA CCGATTTCGA GCGGGGATTC
ATCAAGGCCG AGATCGTCTC CTACGCCGAC CTCGCGCGGC TGGGCAGCGT CGCGGCCGCG
CGCGAAGCCG GCAAATACCG GCTCGAAGGC AAGGACTACG TTTTCCAGGA AGGCGACGTC
GCACTGTTCC GGTTCAACGT CTAG
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| Protein sequence | MLKAGIVGLP NVGKSTLFNA LTRSRKAEAA NYPFCTIDPN VGVVTVPDDR LEPLSKISKT
SVTVPAAIEF VDIAGLVAGA SKGEGLGNQF LANIREVDAV VQVVRCFEDP DVVHTMGGID
PVRDIEVITT ELVLADLDAV AKRIEKAQKK ARGGDKEGIA ELALLEKLQP HLNAGKTANL
LPATPEETAL MKLFQLLTAK PVLFACNVAE SDLATAEQNP FVRKVADYVA HHHDAAYVPI
SAKIEAELID LPPDEAKAFL RDLGVEDSGV SSLIRATYDL LGLQTYFTAG EKEVRAWTIK
KGWKAPQAAG VIHTDFERGF IKAEIVSYAD LARLGSVAAA REAGKYRLEG KDYVFQEGDV
ALFRFNV
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